Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02504 ATGCCAACAAGCTTCAACCATCATTCAGTGTGGTATGAACCGATTTTGAAATCGATCTCTAACTCAACAGAAATGCTCTACACCTACAACAATGAAATTCACAGATTCTTTACAAGGCTAACAGCTAAAGAAGCTCAATTGCTAAAGAGCCAAATCGGAGTTCTAAAGGTGTTTCCAGATAAACAATACAAGCTCCACACAACAAGAACCCCACACTACCTTGGCCTCAACAAAATCCAGGGCACATTCCTCGAGACAAATGGCAAAGAAGGTAGTGACGTAATTGTTGGACTCCTCGGTACTGGTGTTTGGCCTAAAAGCAAGAGCTTCGACGATACTGGATTTGGACCCATCCCTAGCACCTGGAAAGGAAAATGTGAAACAAGTACCAATTTCTCAACCTCGAACTGTAATAAGAAATTGATTGGAGCCAAGTTTTATATAAAGGGCCAGGAGTCCTTTATGGGTCGGCTCGATGAATCCATGGGTTTATTATCGCCTCTGAGGGGTTCTATATCACCTCGAGATGATGATGGTCATGGCACCCATACTGCAAGAATAGCTACAGGGTCTCCGATGCAAAACGCGTTCCTTTTCGGATATGCTAATGGAACAGCACACGGGATGGCCCCGAGCGCCAGAGTCGCTATGTATAAGGTTTGTTGCAATGAATCTTGTGCTTTTTCTGATATATTAGCTGCAATTGACCAGGCCATCATTGATAATGTAAATATCCTTTCCATTTCGCTCGGTGGTCCACAATTTGAGTACTGTGAGGACCCTGTCGCAATCGGAGCCTTTTCGGCTATGGAGCATGGGATTCTAGTCTCTTGCTCTGCAGGAAACGCTGGTCCTGAACCCGCCAGTGCTACCAATATAGCACCTTGGTTTTAG 894 0.4474 MPTSFNHHSVWYEPILKSISNSTEMLYTYNNEIHRFFTRLTAKEAQLLKSQIGVLKVFPDKQYKLHTTRTPHYLGLNKIQGTFLETNGKEGSDVIVGLLGTGVWPKSKSFDDTGFGPIPSTWKGKCETSTNFSTSNCNKKLIGAKFYIKGQESFMGRLDESMGLLSPLRGSISPRDDDGHGTHTARIATGSPMQNAFLFGYANGTAHGMAPSARVAMYKVCCNESCAFSDILAAIDQAIIDNVNILSISLGGPQFEYCEDPVAIGAFSAMEHGILVSCSAGNAGPEPASATNIAPWF. 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02504 297 CDD Peptidases_S8_3 63 296 IPR034197 -
Seca3g02504 297 Gene3D Peptidase S8/S53 domain 93 296 IPR036852 GO:0004252|GO:0006508
Seca3g02504 297 Pfam Peptidase inhibitor I9 5 66 IPR010259 -
Seca3g02504 297 Pfam Subtilase family 91 285 IPR000209 GO:0006508|GO:0008236
Seca3g02504 297 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 66 IPR037045 -
Seca3g02504 297 SUPERFAMILY Subtilisin-like 65 293 IPR036852 GO:0004252|GO:0006508
Seca3g02504 297 ProSiteProfiles Serine proteases, subtilase domain profile. 62 297 - -
Seca3g02504 297 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 296 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02504 Seca-Chr3 44873450 44874343 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02504 1 297 Subtilisin-like Serine Gene Family AT5G67360 60.269 6.46e-121 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02504 - - lja:Lj0g3v0354679.1 377.867