Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02503 ATGCCAGCAAGCTTCAACCATCACTCAGTGTGGTATGAATCGATCTTGAAATCGATCTCTAACTCAACAGAAATGCTCTACACCTACAACAATGCAATTCATGGATTCTTTACAAGGCTAGCAACTGAAGAAGCTCGATTGCTAAAGAGCCAAATCGGAGTTCTAAAGGTGTTTCAAGATAAACAATACAAGCTCCACACAACAAGAACCCCACACTTCCTTGGCCTCGACAAAATCCAGGGCACATTCCTCGAGACAAATGGCAAAGAAGGTAGTGACGTAATTGTTGGACTCCTCGATACTGGTGTTTGGCCTGAAAGCAAGAGCTTCGACGATACTGGATTTGGACCCATCCCTAGAACCTGGAAAGGAAAATGTGAAACAGGTACCAATTTCTCAACCTCGAACTGTAATAAGAAATTGATTGGAGCCAGGTTTTATATAAAGGGCAAGGAGTCCTTTATGGGTCAGCTCGATGAATCCATGGGTTTATTATCGCCTCGAGATGATGATGGTCATGGCACCCATACTGCAAGCACAGCTACAGGGTCTCCGGTGCAAAACGCGAGCCTTTTTGGATATGCTAATGGAACAGCACGTGGGATGACCCCGAGCGCTAGACTCGCTATGTATAAGGTTTGTTGGAATGAATCTTGTGTTGTTTCTGATATATTAGCTGCAATTGACCAGGCCATCATTGATAATGTAAATATCCTTTCCATTTCGCTCGGTGGTCCACAATTTGAGTACTATGAGGACCCTGTCGCAATCGGAGCCTTTTCGGCTATGGAGCATGGGATTCTAGTCTCTTGCTCTGCAGGAAACGCTGGTCCTGAACCCGCCAGTGCTACCAATATAGCACCTTGGATGACCACCGTGGGAGCTGGCACACTTGATCGAGATTTTCCCGCATACGTTAGAATCGGAAATGGACAAAATTATTCTGGAGTGTCCCTTTATAGTGGAAATCCTTTGCCCGATCATCCATTGCCGTTCATATACGCAGGGAATGCAAGCAATTCTGAATATTGCTTGAAGGATAGTTTGGCGCCAGAAAAAGTTAAGGGAAAGATTGTATTGTGTGACCGTGGACAAAGTAGTAGGATAGAGAAAGGAAATACAGTGAAATCTGTTGGCGGTTTGGGCATGGTTTTAGCTAATATGGACCTCGACGGAGAGGAACTAGTGGCAGATGCCCATATTTTGCCTGCAACTTTAGTGGGCTCAAAAGAAGGTAATGCCATCAAGCAATACTTGTTTTCTAATCCAAAATCGACGGGTACAATTGTATTTCAGGGAACAAAGCTTGGAATTGAGCCATCACCAGTTGTTGCATCATTCAGCTCTCGAGGCCCTAATTCTATCACCCCAAAGATATTAAAGCCCGATTTGATCGCACCGGGTGTTAACATCTTAGCAGCATATTCAAGAAATGCGAGCCCCACTGATTTGGATTCAGATGATAGACGTGTGGACTTCAACATCATCTCGGGCACGTCCATGTCATGCCCTCATGTAAGTGGGCTAGCAGCTCTAATCAAGTTGGCTCATCCAGATTGGAGCCCAGCCATGATTCGATCTGCACTGATGACCACGAGCTATACAACTTACAAGAATGGTCAACCATTGTTGGACAGTGCCAACAAAAAACCAGCAACACCGTTTGATTATGGTGCTGGACACGTGAACCCTGTTCCTTCACTTAATCCAGGTCTGGTTTATGATTTGACAGTGGATAATTATCTAAGCTTCCTTTGTGCGTTAAACTACACAACTGATAATATCGAAGCTGTGACGAGGAGAAAGTATAAGTGTGATCCAAACAAACAATATAGTGTAACCGACCTTAATTATCCTTCATTTGTTGTGGTGTTTAAAAAGCCATCAGTTAAACACACGCGAACTCTTACCAATGTGGGGTCTGCGGGAACGTACAAGGTATCGGTTAAGTTGGATATCCCAAATGTTAAGGTCTCGGTTGAGCCTGGAGTGTTGAGTTTCAAGGGGGAAAATGAGAAAAAATCATATACAATTACATTTTCAGCTACATTTCCAACATCAAGAATGAAACCGCAAGATGGTTATGGTTTTGGACGTTTAGAATGGTCAGATGGAAAACATGTTGTGGGAAGTCCAATTGTAGTTAGCTTGGAATGA 2157 0.4372 MPASFNHHSVWYESILKSISNSTEMLYTYNNAIHGFFTRLATEEARLLKSQIGVLKVFQDKQYKLHTTRTPHFLGLDKIQGTFLETNGKEGSDVIVGLLDTGVWPESKSFDDTGFGPIPRTWKGKCETGTNFSTSNCNKKLIGARFYIKGKESFMGQLDESMGLLSPRDDDGHGTHTASTATGSPVQNASLFGYANGTARGMTPSARLAMYKVCWNESCVVSDILAAIDQAIIDNVNILSISLGGPQFEYYEDPVAIGAFSAMEHGILVSCSAGNAGPEPASATNIAPWMTTVGAGTLDRDFPAYVRIGNGQNYSGVSLYSGNPLPDHPLPFIYAGNASNSEYCLKDSLAPEKVKGKIVLCDRGQSSRIEKGNTVKSVGGLGMVLANMDLDGEELVADAHILPATLVGSKEGNAIKQYLFSNPKSTGTIVFQGTKLGIEPSPVVASFSSRGPNSITPKILKPDLIAPGVNILAAYSRNASPTDLDSDDRRVDFNIISGTSMSCPHVSGLAALIKLAHPDWSPAMIRSALMTTSYTTYKNGQPLLDSANKKPATPFDYGAGHVNPVPSLNPGLVYDLTVDNYLSFLCALNYTTDNIEAVTRRKYKCDPNKQYSVTDLNYPSFVVVFKKPSVKHTRTLTNVGSAGTYKVSVKLDIPNVKVSVEPGVLSFKGENEKKSYTITFSATFPTSRMKPQDGYGFGRLEWSDGKHVVGSPIVVSLE. 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02503 718 Pfam PA domain 341 415 IPR003137 -
Seca3g02503 718 ProSiteProfiles Serine proteases, subtilase domain profile. 62 568 - -
Seca3g02503 718 Pfam Peptidase inhibitor I9 4 66 IPR010259 -
Seca3g02503 718 CDD Peptidases_S8_3 63 534 IPR034197 -
Seca3g02503 718 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 715 IPR045051 -
Seca3g02503 718 MobiDBLite consensus disorder prediction 165 184 - -
Seca3g02503 718 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 66 IPR037045 -
Seca3g02503 718 FunFam subtilisin-like protease SBT1.5 299 436 - -
Seca3g02503 718 Pfam Fibronectin type-III domain 615 715 IPR041469 -
Seca3g02503 718 SUPERFAMILY Subtilisin-like 65 572 IPR036852 GO:0004252|GO:0006508
Seca3g02503 718 CDD PA_subtilisin_like 305 429 - -
Seca3g02503 718 Gene3D - 299 437 - -
Seca3g02503 718 Gene3D Peptidase S8/S53 domain 93 581 IPR036852 GO:0004252|GO:0006508
Seca3g02503 718 Pfam Subtilase family 91 560 IPR000209 GO:0006508|GO:0008236
Seca3g02503 718 PRINTS Subtilisin serine protease family (S8) signature 497 513 IPR015500 -
Seca3g02503 718 PRINTS Subtilisin serine protease family (S8) signature 91 110 IPR015500 -
Seca3g02503 718 PRINTS Subtilisin serine protease family (S8) signature 169 182 IPR015500 -
Seca3g02503 718 FunFam Subtilisin-like protease SBT1.5 585 718 - -
Seca3g02503 718 ProSitePatterns Serine proteases, subtilase family, serine active site. 498 508 IPR023828 -
Seca3g02503 718 Gene3D - 585 717 - -
Seca3g02503 718 FunFam Subtilisin-like protease SBT1.5 93 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02503 Seca-Chr3 44738414 44740633 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02503 1 716 Subtilisin-like Serine Gene Family AT5G67360 64.722 0.0 959
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02503 - - gmx:100815413 983.015