Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02495 ATGGCCTTGTCAAGCCCACACCTACAAAGATTCCTGTTAAGCAAGCTTCATCATGGCCGCTACACCACTCCTCACAGAAACACCACCTTCACCATTACCACCAGAACCCGCCGCTGCTGCTCTGCCATAGCCATTGATGCTCCTTCATCATCTTTGACTGACTCACCTGCTATTCGATGGGGATCCATAGCTTTGCAGGGTTCCCGTGAAGAGATGGAAGATGATATTATTGTCCGATCTGATGGCCTTAACGGTTTCTCCTTTGCAGCTGTCTTTGATGGCCATGGAGGGTTTTCTTCCGTCAAGTTCCTCAGGGATGAGCTGTACAAGGAGTGTGTTGAAGCTTTACAAGGTGGGTTACTATTAGTTGGGAATGATTTCAAGGTCATTAGAGAAGCATTGCAAGAGGCATTTCTGAAGGCTGACTCGAGATTGTTAAAATGGCTTGAAATGAATGGGGAGGAGGAGGATGAATCAGGTGCTACGGCAACTACGGTGTTCATAGGAGATGATAACTTGCTAATTTCACATCTTGGTGACTCGTCTGCGGTTCTATGCAGATCTGGAAAAGCAGAAGTGCTGACTATTCCTCACCGACCATATGGGAACAACAAGACTTCTCTTCAAGAAATCAAAAGAATCAGAGAAGCAGGTGGATGGCTTGTCAATGGTAGAATTTGTGGAGACATTGCTGTATCTCGTGCATTTGGGGACATGCGATTCAAAACAAAGAAGAATGAGATGCTGCGAAAAGGGGTTCAGGAAGGAAGATGGTCAGAAAAGTTTATTTCTCGTGTACAACTCAACAATGACTTGGTTGTTGCATTCCCTGATGTTTATCAAGTAGCTCTTGGCTCAGATGCAGAATTTGTAGTATTAGCATCAGATGGCTTATGGGATTACATGAGCAGCTCAGATGCAGTTTCTTTTGTGAGGGATCAACTACGAAAACATGGAAACATACAGCAAGCTTGTGAAGCGCTTGCAGAAGCCGCTTTGGATCGACGCACACAGGATAATGTCAGCATTATAATTGCCGATTTAGGGTATGTATCTTCTCATGTATATATCATTTTGGACTTTGGCAATAAAGTTCTGATTATTGGCCACGCCTTTGTGAAAAATGAAACTGGGGCTAACATATAA 1146 0.4398 MALSSPHLQRFLLSKLHHGRYTTPHRNTTFTITTRTRRCCSAIAIDAPSSSLTDSPAIRWGSIALQGSREEMEDDIIVRSDGLNGFSFAAVFDGHGGFSSVKFLRDELYKECVEALQGGLLLVGNDFKVIREALQEAFLKADSRLLKWLEMNGEEEDESGATATTVFIGDDNLLISHLGDSSAVLCRSGKAEVLTIPHRPYGNNKTSLQEIKRIREAGGWLVNGRICGDIAVSRAFGDMRFKTKKNEMLRKGVQEGRWSEKFISRVQLNNDLVVAFPDVYQVALGSDAEFVVLASDGLWDYMSSSDAVSFVRDQLRKHGNIQQACEALAEAALDRRTQDNVSIIIADLGYVSSHVYIILDFGNKVLIIGHAFVKNETGANI. 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02495 381 FunFam Protein phosphatase 2C 57 58 355 - -
Seca3g02495 381 PANTHER PROTEIN PHOSPHATASE 2C 63 346 IPR015655 GO:0004722|GO:0006470
Seca3g02495 381 Pfam Protein phosphatase 2C 61 341 IPR001932 -
Seca3g02495 381 SUPERFAMILY PP2C-like 55 349 IPR036457 -
Seca3g02495 381 ProSitePatterns PPM-type phosphatase domain signature. 88 96 IPR000222 GO:0043169
Seca3g02495 381 Gene3D - 58 353 IPR036457 -
Seca3g02495 381 ProSiteProfiles PPM-type phosphatase domain profile. 59 348 IPR001932 -
Seca3g02495 381 CDD PP2Cc 58 348 IPR001932 -
Seca3g02495 381 SMART PP2C_4 49 346 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02495 Seca-Chr3 44633803 44638277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02495 1 325 PP2C-type Phosphatase Gene Family AT4G27800 63.804 8.36e-153 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02495 K04457 - vra:106776113 556.984