Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02466 ATGCAATCAGTTGATGAACAGAAGAGAAATCCAAAGCGTCCAAAATCACTGTCCTTCAAAATGCCTGTGACAGACTTAAATGATGTGCAAAATCTTGATGATAGCATTCTTTTCCCTGTCGAAGAGATTGTACAATACCCATTGCCTGGATATGTATCACCAACTTCAATAAGCTTCAGTCCTGATGATAGTTTAATTTCTTATTTATTTAGTCCTGAGCACACATTAAACAGAAAGGTTTTTGCTTTTGATCTGAAGAACAATACACAAGAGTTGTTATTCAGTCCTCCCGATGGTGGACTTGATGAGAGTAATATTTCTCCAGAAGAAAAGTTGAGGAGGGAGAGGTTGAGGGAGCGTGGTTTAGGAGTGACAAGGTATGAATGGGTGAAGACAAGCTCAAAAAGAAAAGCAGTCATGGTGCCATTGCCTGCTGGGATTTATATCCAGGATATTTCCCATTCAAAAGCAGAGCTCAAGCTTCCAAGTATATCAGGTTTACCCATTATTGATCCACATCTGTCTCCTGATGGATCAATGCTTGCTTATGTAAGAGACTATGAGTTGCATGTTTTGAATCTCTTGTCTTATGAATCAAAGCAGTTGACACACGGTGCAAAAGAAAATGGCGTGATTCATGGGCTTGCTGAGTATATAGCTCAGGAGGAGATGGATAGAAAAACTGGATATTGGTGGTCACTGGACAGTAAATATATTGCTTTTACTGAAGTTGATTCTTCTGAAATACCACTTTTTAGAATTATGCACCAAGGTAAGAGCTCAGTGGGTTCAGACGCACAGGAAGACCATCCTTATCCTTTTGCAGGAGCTTCAAATGTTAAAGTGCGCCTTGGGGTTGTTTCGGTTGCTGGAAGCTCGATCACTTGGATGGATCTTCTCTGTGGGGGCATGGAACATCAAGACAATGAAGATGAATATTTGGCAAGAGTCAATTGGATGCATGGAAACATTCTCACTGCTCAGATCTTGAACAGAAAACACACTAAAATGAAGATCCTTAAGTTTGATATTAGAACAGGCCAAAGGAAAACTATATTAGTGGAAGAAAATAGCACTTGGATCAATATACATGACTGCTTCACACCTCTTGATAAAGGAATTACCAAGTTTTCAGGCGGGTTTATCTGGGCTAGTGAGAAAACAGGATTCAGACATCTTTATCTTCATGATGCAAATGGGACTTGTTTAGGACCCATCACTGAAGGTGAATGGATGGTTGAGCAAATCGCTGGTGTGAATGAGGCTACAGGTCTAGTTTATTTTACTGGGACCTTAGATGGTCCTCTGGAGTCTAACTTATATTGTACTAAACTTTTTGTTGATGGAAGTCAACCACTTCAGGTCCCTGTCAGGCTTACACATAGCAAGGGGAAGCACATTGTGATCCTGGATCACCATATGCGAAGTTTTGTTGATATCCATGATTCCCTTGGTTGTCCTCCTAGGGTGTTGCTTTGCTCGTTAGATGATGGAAGCATAATCATGCCTTTGTATGAGCAGCCATCTACTATCCCAAGATTCAAAAGGCTTCAACTTGAGCCACCAGAGATTGTTGAAATACAGGCTAATGATGGCACTGCATTGTATGGAGCTCTATATAAACCTGATGCTTCAAGATTTGGGCCTCCACCTTACAAAACTATGATCAATGTTTATGGCGGTCCAAGTGTACAGCTTGTTTGCAACTCTTGGCTTAATACAGTTGACTTGAGAGCACAATACTTGAGAAACCAAGGCATCTTAGTTTGGAAGTTAGACAATAGAGGAACTGCTAGACGAGGGTTGAAGTTTGAAAGCTATTTAAAGCACAAACTTGGTCAAGTTGATGCTGATGACCAGCTAACTGGAGCAGAGTGGCTTATCAAACAAGGGCTTGCAAAAGCTGGTCACATTGGGCTGTATGGGTGGAGCTATGGTGGGTATCTCTCTGCTATGACACTGTCAAGATATCCAGATATATTCAAGTGTGCTGTGGCTGGTGCACCTGTTACATCATGGGATGGATATGACACATTCTACACAGAGAAGTACATGGGATTGCCGTCTGAGAATCAATCAGGGTATGAAAGTGGTTCTGTTATGAATCAAGTGCACAAGTTGAAAGGGCGTTTGTTGCTTGTGCATGGCATGATTGATGAGAATGTACATTTTAGGCACACTGCAAGGCTTATCAATGCACTTGTGGCAGCTGGAAAACCCTATGAGCTAGTCATTTTCCCAGATGAGCGTCACATGCCTCGGCGTCATAGTGATAGAGTTTATATGGAAGAGAGGATGTGGGACTTCATAGAGAGAAATCTGTGA 2325 0.4155 MQSVDEQKRNPKRPKSLSFKMPVTDLNDVQNLDDSILFPVEEIVQYPLPGYVSPTSISFSPDDSLISYLFSPEHTLNRKVFAFDLKNNTQELLFSPPDGGLDESNISPEEKLRRERLRERGLGVTRYEWVKTSSKRKAVMVPLPAGIYIQDISHSKAELKLPSISGLPIIDPHLSPDGSMLAYVRDYELHVLNLLSYESKQLTHGAKENGVIHGLAEYIAQEEMDRKTGYWWSLDSKYIAFTEVDSSEIPLFRIMHQGKSSVGSDAQEDHPYPFAGASNVKVRLGVVSVAGSSITWMDLLCGGMEHQDNEDEYLARVNWMHGNILTAQILNRKHTKMKILKFDIRTGQRKTILVEENSTWINIHDCFTPLDKGITKFSGGFIWASEKTGFRHLYLHDANGTCLGPITEGEWMVEQIAGVNEATGLVYFTGTLDGPLESNLYCTKLFVDGSQPLQVPVRLTHSKGKHIVILDHHMRSFVDIHDSLGCPPRVLLCSLDDGSIIMPLYEQPSTIPRFKRLQLEPPEIVEIQANDGTALYGALYKPDASRFGPPPYKTMINVYGGPSVQLVCNSWLNTVDLRAQYLRNQGILVWKLDNRGTARRGLKFESYLKHKLGQVDADDQLTGAEWLIKQGLAKAGHIGLYGWSYGGYLSAMTLSRYPDIFKCAVAGAPVTSWDGYDTFYTEKYMGLPSENQSGYESGSVMNQVHKLKGRLLLVHGMIDENVHFRHTARLINALVAAGKPYELVIFPDERHMPRRHSDRVYMEERMWDFIERNL. 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02466 774 Gene3D - 39 514 - -
Seca3g02466 774 SUPERFAMILY DPP6 N-terminal domain-like 52 508 - -
Seca3g02466 774 Pfam Prolyl oligopeptidase family 575 774 IPR001375 GO:0006508|GO:0008236
Seca3g02466 774 Gene3D alpha/beta hydrolase 515 774 IPR029058 -
Seca3g02466 774 PANTHER PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED 42 772 - -
Seca3g02466 774 Pfam Dipeptidyl peptidase IV (DPP IV) N-terminal region 136 488 IPR002469 GO:0006508
Seca3g02466 774 SUPERFAMILY alpha/beta-Hydrolases 521 774 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02466 Seca-Chr3 44085804 44093158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02466 522 772 Carbohydrate Esterase AT5G36210 24.621 5.73e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02466 K01278 - gmx:100812178 1447.18