Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02455 ATGTCAGAGTATGATTTGGCAGCAGAGGGAGATCTATTCAAAGCACCAGAACCTATTATTGAAGAGCCAGTCATGGACCTGGATCCTATGACAGCAGCCATCTCGATGATATCTTGTGGGGAAAATGTCACTTCAGAGGGACTTAAATCCACAGATATTGATATTCTTCAAAATGAACAGTTTCTGAATGAGGTATTCTATGAATGCAAAAAGGATCTCTTAGAAAAGGCAGCAATAGAGTCACCACTCTCTGAGATTCTGGAAATCAAGATTCCTGTTCTGAACATAGATGAGAACTCAATTCTAGAAAACAAGCCACTTCCTGACATGCCATTACCAAAGAGTGACAGTTCAGGAAGTTTGAGCTCAATGGACTGGATGCATGGAGGTGCAATGAACCCTGCTTTCCTTGATATCCCAGGAATAGATTTCAATGCAGTTTATGGCATGCGGAGATCATTTAGTGAAGGAGATATAAAGACTCTTGGTAATGGCAATTTGAACACCGTCCAATCTCCCCTTGAGAGGCCATTTCTTATCAGCAACTGTACCAGTGAGGAACGCCGACAAAAACTCTCCAGATACAGGAACAAGAAGACAAAGAGGAATTTTGGGAGGAAAATCAAGTATGCTTGCAGGAAAGCTCTTGCAGACAATCAACCAAGAATCCGTGGAAGATTCGCAAGGACTGATGAATCTGAGGCCAAGAGAGAATGA 717 0.4212 MSEYDLAAEGDLFKAPEPIIEEPVMDLDPMTAAISMISCGENVTSEGLKSTDIDILQNEQFLNEVFYECKKDLLEKAAIESPLSEILEIKIPVLNIDENSILENKPLPDMPLPKSDSSGSLSSMDWMHGGAMNPAFLDIPGIDFNAVYGMRRSFSEGDIKTLGNGNLNTVQSPLERPFLISNCTSEERRQKLSRYRNKKTKRNFGRKIKYACRKALADNQPRIRGRFARTDESEAKRE. 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02455 238 ProSiteProfiles CCT domain profile. 188 230 IPR010402 GO:0005515
Seca3g02455 238 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 115 232 IPR045281 GO:0009909
Seca3g02455 238 Pfam CCT motif 188 230 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02455 Seca-Chr3 43789370 43794579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02455 184 235 C2C2-CO-like Transcription Factor Family AT5G24930 52.830 5.11e-10 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Seca3g02455 CCT 5.1e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02455 - - gmx:100814332 409.838