Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02452 ATGGCACTTTCTAGAACTGGGCCAAACCCAATTCCGGAGAGTGATGGCTTAGCTTATTCGGCTAGAAATTTGTCGACAAGACTTGTGTTACCTGTTCCCCTGCGTTTCACTGGACAGTTATCTAATCTAGTAGGCAGGAGAAAGAACAAGGGAGTATGCTGCTCATCATTGAGGAAAGCTGTATCTGCATCTTCTACGGAATCACAGGAAGATGCTCCAAGTTCCTTTTCGGTTTGCTTGGAGGAGGAACTGGATCATGTTATACGGTTCAAAATGTCAGACTTCAAGATTTTAAATCATGTTAGCATTGGCCTTGGTGGGCGGGCGGATGAGGTAGTTTTTGAAGGCAAGGTGAAGGATAGTGGTAGCCCTTTGTATAACACAAGAGTTGTACTTCGACAGCTTTCTAGTGCCCAAGCTCAGCGTCGAGGCAAACGAGCAATAGAGGTATTGAAGAAACTGGTTCACCGTAAACTTTTGTATCATTCTTACTCAATGCAAGTTCATGGCTATATCTCTTTGCCTGCCAATGATGGTGGTTCATTTATCCTTGTCCATGGGTATCATGGTAGTTTTTCTTTGAGACACTGGCTTCAACAGTCAGATTGGCTTCCAACTTTGGAGGCCACTCTTGCACTGGATGAAGAGTCTGTTAGGAAGGTAGGAGAAGACACAACTGGAGGTCCCGCAGTTTCCAGGCAGTTGCGACTTATTCGAATATTGATGAGGGATCTTCTAATTGGGGTAAATTACCTGCATAGCCATGGTCTTGCCCATACAGAGTTGAGGCTGGAAAATGTGCATATAAGCCCAATAGACAGGCATATCAAAGTAGGTATACTGGGAAATGCTGCTGATTTTTATGAGGATGGTTCAAATAGTGTCTCTATGGACAACATGGACAGGCGACAGATGATGATTGCATTTGACATGAGGTATGGCCTGGCAAATTGTCAGTGA 960 0.4427 MALSRTGPNPIPESDGLAYSARNLSTRLVLPVPLRFTGQLSNLVGRRKNKGVCCSSLRKAVSASSTESQEDAPSSFSVCLEEELDHVIRFKMSDFKILNHVSIGLGGRADEVVFEGKVKDSGSPLYNTRVVLRQLSSAQAQRRGKRAIEVLKKLVHRKLLYHSYSMQVHGYISLPANDGGSFILVHGYHGSFSLRHWLQQSDWLPTLEATLALDEESVRKVGEDTTGGPAVSRQLRLIRILMRDLLIGVNYLHSHGLAHTELRLENVHISPIDRHIKVGILGNAADFYEDGSNSVSMDNMDRRQMMIAFDMRYGLANCQ. 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02452 319 Gene3D Transferase(Phosphotransferase) domain 1 141 311 - -
Seca3g02452 319 ProSiteProfiles Protein kinase domain profile. 95 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g02452 319 SUPERFAMILY Protein kinase-like (PK-like) 90 293 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02452 Seca-Chr3 43759904 43765997 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Seca3g02452 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02452 - - lja:Lj0g3v0108699.1 532.717