Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02381 ATGTCTCCCAAGTCACAATCCAAACTAATTGATGGAAAAGTGTTCCTTTACCAAGCATCTTCTGCAGCTTATCAAATTGTGTTCGTCCACTGGAAATTCCTCTATCCCCCAAAAACAGGGTGTCATAATTCAGATCCCATGGAGGATTTGGGCACATTTTCAGTCATGTTGGCAATTGAGTTGTTGGAAGTTACTGTCAACACTGTGAGCAAAGCAGCCATGAAGAGAGGCATGAATAACTTTGTATTTATCATGTACTCCAACGCCTTCACAGCTTGCTTCCTCCTTCCCTTCACCCTAATCTTTTATAGGAAACGTACTCTTCCGCCAATCACAAATTGGATCGTTGGCCTATTATTTGTTGCTAGCTTTTTCAGTTGCACTATTCAGATGCTCAAGTTTTTTGGCATAGCTTACAGCTCTCCCACTTTGGCCTCAGTAATGTCTGATTTAGTCCCCGGTTTTACCTTCATACTTGCTGTCTTCTGCAGGATGGAAAAATTTGACTATAAAGCTAACAGCACTCAGGTCAAGTCTTATGGCACATTGGTATCAATCGCTGGGCCTTTGATAATTACTCTGTACAAAGGCCAGCCAATCATAAATAATCATCCTAATTTGAGTAATCTTCTTTCATCTGAGCAATTTGACTGGATATTTGGGGGAGCGTTGCTTGCCGCTTTTAGCTGTATGCTCTCATTCCTTCATATAGTTCTGGTAATCAATACTCAGTACATTTCTCAACAAGCATGGCTCAGAATATTGAGTTTACTTTTACTTCCTTCATTACTTCTAGACATGGTTAATCAGAGAGTACCCTGCAGAGCTTATGGTAGTACTCATTCGCAGTATGATAGTGTCTGTGCTATCTGTTCCAGCTGTGTTGATTTCAGAAAAAGACCCAAAAGCTTGGAGACTGGGACTTAA 927 0.4078 MSPKSQSKLIDGKVFLYQASSAAYQIVFVHWKFLYPPKTGCHNSDPMEDLGTFSVMLAIELLEVTVNTVSKAAMKRGMNNFVFIMYSNAFTACFLLPFTLIFYRKRTLPPITNWIVGLLFVASFFSCTIQMLKFFGIAYSSPTLASVMSDLVPGFTFILAVFCRMEKFDYKANSTQVKSYGTLVSIAGPLIITLYKGQPIINNHPNLSNLLSSEQFDWIFGGALLAAFSCMLSFLHIVLVINTQYISQQAWLRILSLLLLPSLLLDMVNQRVPCRAYGSTHSQYDSVCAICSSCVDFRKRPKSLETGT. 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02381 308 Pfam EamA-like transporter family 64 169 IPR000620 GO:0016020
Seca3g02381 308 SUPERFAMILY Multidrug resistance efflux transporter EmrE 88 171 - -
Seca3g02381 308 PANTHER WAT1-RELATED PROTEIN 53 246 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02381 Seca-Chr3 42344551 42345993 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02381 48 238 Nodulin-like Gene Family AT5G40240 37.931 1.49e-33 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02381 - - gmx:100804032 242.662