Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02378 ATGGGGAAAGTGTCAGTTCCTTTTATGGGAATGATTATGGCGGAGTGTGCTCAAGTTGGCTTAATCATATTGAGCAAACAAGTCATGGCAGAAGGGATGACCAATTTCATATTCATCTTCTACTCCAACGCAATCGCTTCCCTCCTTCTCCTTCCCACTTCCTTCCTTGTCCACAGATTTCAACGTCCTCCAATCACGTTTTCTACCCTTTGTGGATTTTTCTTACTTGGACTACTTGGGCAAGTTCATCCTATTCCTTGCTTATATTTCCGTAATCCTTATTTGGCGCAGGCTTTTGGGTACGCTGGGATTTACTACAGCTCAGCAACACTTAGCACATCCATGCTCAATCTTGTTCCTGGTTTTACTTTCATACTTGCCGTTGTTTTTAGGCTGTCTAAACACATCCTACTTTCTGGTTTCAGAATGGAACAATTAGATTGGAGTAGCTCTAGCAGCCTAGCTAAATCATTGGGAACAGTAGTATCGATTGCTGGTGCATTTATTGTGACATTGTACAAGGGCCCTGCACTTTTGATGGGACTATCACCTGAAAACTCATCTCAGCAGCCAGTTTCCTCACAAGATTCTAATTGGATACTTGGAGGATTATTTCTTGCTGTTGACTGTGTGATGGCTTCAGCATATATTATTGTACAGGCTTCTATCCTTAAGAAATATCCAGCAGAGTTGATTGTTGTATTCTTTTATTGTTTCTTTGTGGCCATTCAATCTGCTGTGACCAGTTTGGTTGTGGAAAGAGACTTAAGTGCTTGGAGCTTGGAACCTAAGTTTAGGTTGCTTGCAGTTTTATACTCGGGAATCTTTGGCTCTGCATTTCAAGTTGGTGTTATTACTTGGTGTTTGCACCAGACAGGACCTGTTTTTGTTTCCATGTTCAAGCCTTTAGGCATTGTCATATCGGTTGTTATAGGCGTTCTCTTCCTTGGGGATGCATTCTATCTTGGAAGTCTGATTGGTGCTACTGTGATTGTTCTTGGATTTTATTCTGTATTGTGGGGGAAATCCAAAGATATTGAAATGAGAAGCTTGGAACCAAGGGGCAAACAGACCCCACTTTTGAAGGAAAACGGCAGTGAAGACATGTAA 1110 0.4162 MGKVSVPFMGMIMAECAQVGLIILSKQVMAEGMTNFIFIFYSNAIASLLLLPTSFLVHRFQRPPITFSTLCGFFLLGLLGQVHPIPCLYFRNPYLAQAFGYAGIYYSSATLSTSMLNLVPGFTFILAVVFRLSKHILLSGFRMEQLDWSSSSSLAKSLGTVVSIAGAFIVTLYKGPALLMGLSPENSSQQPVSSQDSNWILGGLFLAVDCVMASAYIIVQASILKKYPAELIVVFFYCFFVAIQSAVTSLVVERDLSAWSLEPKFRLLAVLYSGIFGSAFQVGVITWCLHQTGPVFVSMFKPLGIVISVVIGVLFLGDAFYLGSLIGATVIVLGFYSVLWGKSKDIEMRSLEPRGKQTPLLKENGSEDM. 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02378 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 259 343 - -
Seca3g02378 369 Pfam EamA-like transporter family 202 339 IPR000620 GO:0016020
Seca3g02378 369 PANTHER WAT1-RELATED PROTEIN 6 346 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02378 Seca-Chr3 42308925 42313792 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02378 6 368 Nodulin-like Gene Family AT5G40240 40.379 6.51e-86 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02378 - - gmx:100804932 537.339