Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02376 ATGGAGTCTAAGACTAAGATGTCAGAAGTTCTGCCATTCATAGTAATGGTCATTATGGAAGGGTGCACTATAGCACTCACCATTTTTGCAAAAACTGAAATAACTAAAGGAATGAGCCCATTTGTGTTCATTGTTTATACCAATGCTCTGGCCACTATAATACTCTTTCCTTGTTCCTTTCTATTTCACCACAAGGACAGAAAGGAGCAGCCACCTTTCACTTTCTCTTTGTTTATGCGTTTCTTGCTCCTGGGTTTTACAGGAATAACCATGACTCAGAGCTTTTTATTCCTGGGTCTAAGCTACAGTTCCCCAATACTTGTGTGTGCCATGGGACACTTGATCCCAATGTTTAGTTTCCTGCTCTCTGTCATTCACAGGAAAACAGAGTTGAATTTTAGAAGCTCTGCTATCCAAGTCCAAATGATTGGTATTTTGGTATCGATAATGGGAGCAGTGCTAGCTGAATTCTTCAAGGGGCCACTTATAAGACCCTCTTCTCACCACCTTCAACACACAAAGCAACTTTTTTTGTTCTCATCGACACCAGAATTTTGGGTTCTTGGTGGCGTTTTGCTTGCTGCAGCTTCCTTCTCAGTTGCACTTTCTAACTTCATCCAGAAAGAAACTGTTGAGCAATATCCAAAACCAATGAAGGTGGTGTTTTATTATTGCTTGCTTGGAACGATCCTTAGTGCAATAGTCTCCTTGGTAGTGGAGGGGGACGCAAATGCTTGGAAGCCAAAGCGTAACATGGAGCTCATTCTCATCGTTCTAACTGCACTATTTGGGGGTGTGATTCGTCCCAATGTTCAAATTTGGTTCACTCGCATGAAGGGTCCAAATTATGTGCCACTATTCAAGCCCTTTGGTATTGCTTTTGCCACCACTTTTGGAGTTTGCTTCTTTCCTAATAGCCTTCATTATGGAAGTGTGATAGGAGCAGCTATAATTGGAATGGGGTATTATACAGTATTGTATGGAGAAATATCGAAAGGAGATGAAGAAGAGAAAGGAGGTGACGAAAGCTCAGATTCTTTGGACAAGAAGATACCTCTGTTGCAAGAAAAGATGGAAGTGTAA 1083 0.4137 MESKTKMSEVLPFIVMVIMEGCTIALTIFAKTEITKGMSPFVFIVYTNALATIILFPCSFLFHHKDRKEQPPFTFSLFMRFLLLGFTGITMTQSFLFLGLSYSSPILVCAMGHLIPMFSFLLSVIHRKTELNFRSSAIQVQMIGILVSIMGAVLAEFFKGPLIRPSSHHLQHTKQLFLFSSTPEFWVLGGVLLAAASFSVALSNFIQKETVEQYPKPMKVVFYYCLLGTILSAIVSLVVEGDANAWKPKRNMELILIVLTALFGGVIRPNVQIWFTRMKGPNYVPLFKPFGIAFATTFGVCFFPNSLHYGSVIGAAIIGMGYYTVLYGEISKGDEEEKGGDESSDSLDKKIPLLQEKMEV. 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02376 360 MobiDBLite consensus disorder prediction 333 360 - -
Seca3g02376 360 PANTHER WAT1-RELATED PROTEIN 11 335 IPR030184 GO:0016020|GO:0022857
Seca3g02376 360 Pfam EamA-like transporter family 189 326 IPR000620 GO:0016020
Seca3g02376 360 Pfam EamA-like transporter family 14 154 IPR000620 GO:0016020
Seca3g02376 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02376 Seca-Chr3 42291909 42294075 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02376 1 359 Nodulin-like Gene Family AT1G70260 48.925 2.46e-124 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02376 - - gmx:100803495 553.132