Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02375 ATGGAGGCTAAGACTAAGGTGTCAGAATTGCTTCCATTCATAGTAATGGTGATTATGGAAGGGTGCACTATAGCACTCACCATTTTTGCAAAAACTGAAATAACTAAAGGAATGAGCCCATTTGTGTTCATTGTTTATACCAATGCTCTGGCCACTATAATACTCTTTCCTTGTTCCTTTCTATTTCACCACAAGGACAGAAAGGAGCAGCCACCTTTCACTTTCTCTTTGTTTATGCGTTTCTTGCTCCTCGGTTTTACAGGAATAACCATGACTCAGAACTTTTTATTCCTGGGTCTAAGCTACAGTTCCCCAATACTTGTGTGTGCCATGGGACATTTGATCCCAACGTTTAGTTTCCTGCTCTCTGTCATTCACAGGAAAACAGAGTTGAATTTGAGATGCTCTGCTATCCAAGTCCAAGTGATTGGTATTTTGGTGTCGATAATGGGGGCAGTGCTAGCTGAATTCTTCAAGGGTCCACTTATAAGACCCTCTTCTCACCACCTTCGACACACTAAACAACTTTTTGTCTTCTCATCAACACCAGAGTTTTGGGTTCTTGGTGGAATTTTGCTTGCTGCAGCTTCTTTCTCAGTTGCACTTTCCAACTTTATCCAAAAAGAAACTGTTCAGCAATATCCAAAACCAATGAAGGTGGTGTCTTATTATTGCTTGCTTGGGACGATCCTTAGTGCAATAGTCTCATTGATAGTGGAGAGGGACACAAATGCTTGGATGTTAAAGCGTAACATGGAGCCCATTCTCATTGTTCTAACTGCACTATTTGGGGGTGTGATTCGTCCCAATGTTCAAATTTGGTTCACTCGCATGAAGGGTCCAAATTATGTTCCACTGTTCAAGCCCTTTGGTATTGCCTTTGCCACCACTTTTGGAGTTTGCTTCTTTCCTAACAGCCTTCACTATGGAAGTGTGATGGGAGCAACTATAATTGGAATGGGATATTATACAGTATTATATGGAGAATTCAAAGGAGATGAAGAAGAGAAAAGCTGTGACGAAAGTTCAGATTCTTTGGACAAGAAGATACCTCTGTTGCAAGAAAAGATGGAAGTGTAA 1080 0.4093 MEAKTKVSELLPFIVMVIMEGCTIALTIFAKTEITKGMSPFVFIVYTNALATIILFPCSFLFHHKDRKEQPPFTFSLFMRFLLLGFTGITMTQNFLFLGLSYSSPILVCAMGHLIPTFSFLLSVIHRKTELNLRCSAIQVQVIGILVSIMGAVLAEFFKGPLIRPSSHHLRHTKQLFVFSSTPEFWVLGGILLAAASFSVALSNFIQKETVQQYPKPMKVVSYYCLLGTILSAIVSLIVERDTNAWMLKRNMEPILIVLTALFGGVIRPNVQIWFTRMKGPNYVPLFKPFGIAFATTFGVCFFPNSLHYGSVMGATIIGMGYYTVLYGEFKGDEEEKSCDESSDSLDKKIPLLQEKMEV. 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02375 359 PANTHER WAT1-RELATED PROTEIN 11 335 IPR030184 GO:0016020|GO:0022857
Seca3g02375 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 157 - -
Seca3g02375 359 Pfam EamA-like transporter family 14 154 IPR000620 GO:0016020
Seca3g02375 359 Pfam EamA-like transporter family 189 326 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02375 Seca-Chr3 42266536 42269042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02375 1 358 Nodulin-like Gene Family AT1G70260 50.538 9.36e-128 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02375 - - vum:124840741 578.17