Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02371 ATGGATAAAAGGTGGGTTTCTTGTGAGGGACTTGGAGTTTTTGGAATGGGAAGGTGTTGGTTGGTTGGGGTCTTGATTGTGGTGGGCTATGCCTGCTTGTTGGGTACTGTTGAGGTAGAAGGGTACCCAGTTGAGGATCTGGTGGTGAAGTTGCCTGGCCAACCCAAGGTTGAGTTCAGGCAATATGCTGGTTATGTTGATATAGATGTCAAGCATGGGAGGAGCTTGTTCTACTATTTTGTGGAGGCTGAACATGACCCTGACAAGAAGCCCCTCACCCTTTGGCTCAATGGAGGTCCTGGATGTTCCTCAATTGGGGGAGGTGCCTTCACTGAATTGGGTCCCTTTTATCCTAGAGGTGATGGACGTGGTCTCAGAACAAATCCAATGTCTTGGAATAGAGCATCTAACCTCATCTTTGTGGAGTCTCCTGCTGGAGTTGGTTGGTCATACTCAAATACAACGTCTGATTATAACTCTGGAGACGCATCCACAGCCAATGATATGCTTGTGTTCATGCTGAAATGGTACGAGAAGTTTCCTTCCTACAGATCAAGGGAGCTGTTCCTCACTGGAGAAAGCTATGCAGGACATTACATACCACAGTTAGCTAATGCTCTTCTGGATTATAATGCTCATTCAACTAGTTTCAAATTCAACATTAAAGGAGTTGCTATTGGAAATCCACTTCTGAAACTTGATCGTGATACACAAGCAACATATGAATATTTCTGGTCACATGGAATGGTTTCCGATGAAATTGGCCTTGCCATTATGAACGATTGCGATTTTGATGATTATACCTTTGATGGTACTCATAATGTATCTAAATCATGCAACGATGCCATAAATAAAGCTAATGAAATTGTTGGCGATTATATAAACAACTACGATGTGATTCTGGATGTTTGTTATCCATCCATAGTTGAACAAGAACTGAGATTGAAAAAGATGCAGGCTACTAAAATAAGTATAGGTGTAGATGTGTGCATGAATTATGAAAGAAGTTGGTACCTCAATCTCCCTGAGGTTCAGAAGGCTCTTCATGCAAACCGTACCAATCTTCCGTATAGATGGTCCATGTGCAGTGGGTTAGTAATACATATTTTGGTACAACTATATGAAATATTTGTAATCTTCTGTGTTTCTTTATGCTTCAATAAACTTGCAAGCAAAATTGAATATTTTGGAGACCAAGATTCTGTTGTGCCATTGCTAGGTTCTCGAACACTCATTCGTGAACTAGCTCAAGATCTGAAGTTCAAGATTACAGTCCCATATGGAGCTTGGTTCCACAAAGGCCAGGTTGGGGGTTGGGTAACGGAGTATGGAAATTTGTTGACTTTTGCCACAGTAAGGGGAGCTGCTCACATGGTACCATATGCACAACCTTCAAGAGCACTGCATCTCTTCAGTTCCTTTGTGCGTGGCAGGAGATTGCCAAACACAACACGCCCTTCAATTGATTAA 1470 0.4211 MDKRWVSCEGLGVFGMGRCWLVGVLIVVGYACLLGTVEVEGYPVEDLVVKLPGQPKVEFRQYAGYVDIDVKHGRSLFYYFVEAEHDPDKKPLTLWLNGGPGCSSIGGGAFTELGPFYPRGDGRGLRTNPMSWNRASNLIFVESPAGVGWSYSNTTSDYNSGDASTANDMLVFMLKWYEKFPSYRSRELFLTGESYAGHYIPQLANALLDYNAHSTSFKFNIKGVAIGNPLLKLDRDTQATYEYFWSHGMVSDEIGLAIMNDCDFDDYTFDGTHNVSKSCNDAINKANEIVGDYINNYDVILDVCYPSIVEQELRLKKMQATKISIGVDVCMNYERSWYLNLPEVQKALHANRTNLPYRWSMCSGLVIHILVQLYEIFVIFCVSLCFNKLASKIEYFGDQDSVVPLLGSRTLIRELAQDLKFKITVPYGAWFHKGQVGGWVTEYGNLLTFATVRGAAHMVPYAQPSRALHLFSSFVRGRRLPNTTRPSID. 490
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02371 489 Gene3D - 385 477 - -
Seca3g02371 489 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 48 464 IPR001563 GO:0004185|GO:0006508
Seca3g02371 489 FunFam Carboxypeptidase 384 477 - -
Seca3g02371 489 FunFam Carboxypeptidase 42 306 - -
Seca3g02371 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 176 201 IPR001563 GO:0004185|GO:0006508
Seca3g02371 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 140 IPR001563 GO:0004185|GO:0006508
Seca3g02371 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 141 151 IPR001563 GO:0004185|GO:0006508
Seca3g02371 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 447 460 IPR001563 GO:0004185|GO:0006508
Seca3g02371 489 Gene3D alpha/beta hydrolase 44 305 IPR029058 -
Seca3g02371 489 Gene3D - 330 366 - -
Seca3g02371 489 SUPERFAMILY alpha/beta-Hydrolases 39 484 IPR029058 -
Seca3g02371 489 ProSitePatterns Serine carboxypeptidases, serine active site. 190 197 IPR018202 GO:0004185
Seca3g02371 489 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Seca3g02371 489 Pfam Serine carboxypeptidase 53 477 IPR001563 GO:0004185|GO:0006508
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Seca3g02371 Seca-Chr3 42244611 42249210 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02371 395 480 Calmodulin-binding Proteins AT2G22960 30.233 2.09e-08 52.4
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02371 K16297 - gmx:100803335 824.698