Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02366 ATGCATGGTGTGTTATTCAGGATTGTGGAGAGTGTAGGAGAGGGTGTGACCCATTTGAAACCAGGGGACCATGCCCTCCCTGTATTCACGGGGGAGTGTGGGGAATGCCCACATTGTAAGTCAGAGGAGAGCAACATGTGTGATCTGCTGAGGATTAACACTGATCGGGGTGTGATGATCCATGACAATGAGTCAAGATTCTCTATTAAGGGAAAGCCTATATTCCATTTTGTGGGAACCTCTACATTCAGTGAATACACTGTTGTCCATGCTGGATGTGTTGCAAAGATCAACCCTGCTGCTCCCCTTGACAAAGTTTGTGTTCTTAGTTGTGGAATATGCACAGGTCTTGGTGCTACTGTCAATGTTGCAAAACCAAAACCTGGTTCTTCCGTTGCTATCTTTGGACTTGGAGCCGTTGGCCTTGCTGCTGCTGAAGGGGCAAGGATTTCTGGTGCATCAAGAATCATTGGGGTTGATCTTGTTTCCAGCCGATTTGAACTTGCTAAGAAATTTGGAGTCAATGAGTTTGTGAACCCAAAAGATCATGACAAACCTGTACAACAGGTAATTGCTGAAATGACCAATGGAGGTGTAGATCGTGCTGTTGAATGTACTGGCAGTATCCAGGCCATGATCTCAGCCTTCGAATGTGTCCACGATGGTTGGGGTGTTGCTGTACTTGTTGGAGTGCCAAACAAGGATGATGCATTCAAAACTCATCCTGTGAATTTCTTGAATGAGAGGACTCTTAAGGGTACCTTCTATGGTAACTACAAACCCCGAACCGATCTTCCTGCTGTTGTGGAGAAATACATGAATGGGGAACTTGAACTGGATAAATTCATCACTCACACAGTTCCATTCTCAGAGATTAACAAAGCTTTTGATTTAATGCTGAAAGGGGAGTCCATCAGGTGTATCATCCGCATGGAGGACTAA 942 0.4501 MHGVLFRIVESVGEGVTHLKPGDHALPVFTGECGECPHCKSEESNMCDLLRINTDRGVMIHDNESRFSIKGKPIFHFVGTSTFSEYTVVHAGCVAKINPAAPLDKVCVLSCGICTGLGATVNVAKPKPGSSVAIFGLGAVGLAAAEGARISGASRIIGVDLVSSRFELAKKFGVNEFVNPKDHDKPVQQVIAEMTNGGVDRAVECTGSIQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPVNFLNERTLKGTFYGNYKPRTDLPAVVEKYMNGELELDKFITHTVPFSEINKAFDLMLKGESIRCIIRMED. 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02366 313 Gene3D - 8 303 - -
Seca3g02366 313 SUPERFAMILY GroES-like 261 310 IPR011032 -
Seca3g02366 313 Gene3D - 116 254 - -
Seca3g02366 313 FunFam Alcohol dehydrogenase class-P 116 254 - -
Seca3g02366 313 FunFam alcohol dehydrogenase 1-like isoform X1 4 115 - -
Seca3g02366 313 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 102 276 IPR036291 -
Seca3g02366 313 Pfam Alcohol dehydrogenase GroES-like domain 8 96 IPR013154 -
Seca3g02366 313 PANTHER ALCOHOL DEHYDROGENASE 7 309 - -
Seca3g02366 313 Pfam Zinc-binding dehydrogenase 139 267 IPR013149 -
Seca3g02366 313 SUPERFAMILY GroES-like 8 120 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02366 Seca-Chr3 42145814 42148589 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02366 8 303 Monolignol Biosynthesis Gene Families AT1G72680 25.581 4.24e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02366 K18857 - gmx:100801918 595.504