Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02365 ATGTCGAGCACAGCTGGACAGGTCATCAAGTGCAGAGCTGCGGTTGCATGGGAGGCAGGGAAGCCACTAGTGATTGAAGAAGTAGAAGTGGCACCACCAAAGGCTGGTGAAGTGCGTTTGAAGATACTCTACACCTCCCTTTGCCACACTGATGTTTACTTTTGGGAAGCCAAGGGCCAGACTCCAGTGTTTCCTCGTATACTTGGTCATGAAGCCGGAGGGATTGTGGAGAGTGTAGGAGAGGGTGTGACCCATTTGAAACCAGGGGACCATGCCCTCCCTGTATTCACGGGGGAGTGTGGGGAATGCCCACATTGTAAGTCAGAGGAGAGCAACATGTGTGATCTGCTGAGGATTAACACTGATCGGGGTGTGATGATCCATGACAATGAGTCAAGATTCTCTATTAAGGGAAAGCCTATATTCCATTTTGTGGGAACCTCTACATTCAGTGAATACACTGTTGTCCATGCTGGATGTGTTGCAAAGATCAACCCTGCTGCTCCCCTTGACAAAGTTTGTGTTCTTAGTTGTGGAATATGCACAGGTCTTGGTGCTACTGTCAATGTTGCAAAACCAAAACCTGGTTCTTCTGTTGCCGTCTTTGGACTTGGAGCTGTTGGCCTTGCTGCTGCTGAAGGGGCAAGGATTTCTGGTGCATCAAGAATCATTGGGGTTGATCTGGTTTCCAGCCGATTTGAACTTGCTAAGAAATTTGGAGTCAATGAGTTTGTGAACCCAAAAGATCATGACAAACCTGTACAACAGGTAATTGCTGAAATGACCAATGGAGGTGTAGATCGTGCTGTTGAATGTACTGGCAGTATCCAGGCCATGATTTCAGCATTCGAATGTGTCCACGATGGTTGGGGTGTTGCTGTACTTGTTGGAGTGCCAAACAAGGATGATGCATTCAAAACTCATCCTGTGAATTTCTTGAATGAGAGAACTCTTAAGGGTACCTTCTATGGTAACTACAAACCCCGAACCGATCTTCCTGCTGTTGTGGAGAAATACATGAATGGGGTAAGCTTATATATAAGAATTGTTTAA 1053 0.4625 MSSTAGQVIKCRAAVAWEAGKPLVIEEVEVAPPKAGEVRLKILYTSLCHTDVYFWEAKGQTPVFPRILGHEAGGIVESVGEGVTHLKPGDHALPVFTGECGECPHCKSEESNMCDLLRINTDRGVMIHDNESRFSIKGKPIFHFVGTSTFSEYTVVHAGCVAKINPAAPLDKVCVLSCGICTGLGATVNVAKPKPGSSVAVFGLGAVGLAAAEGARISGASRIIGVDLVSSRFELAKKFGVNEFVNPKDHDKPVQQVIAEMTNGGVDRAVECTGSIQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPVNFLNERTLKGTFYGNYKPRTDLPAVVEKYMNGVSLYIRIV. 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02365 350 PANTHER ALCOHOL DEHYDROGENASE 6 342 - -
Seca3g02365 350 FunFam Alcohol dehydrogenase class-P 183 321 - -
Seca3g02365 350 Pfam Zinc-binding dehydrogenase 206 333 IPR013149 -
Seca3g02365 350 Gene3D - 19 342 - -
Seca3g02365 350 Pfam Alcohol dehydrogenase GroES-like domain 36 163 IPR013154 -
Seca3g02365 350 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 342 IPR036291 -
Seca3g02365 350 CDD alcohol_DH_plants 9 342 - -
Seca3g02365 350 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Seca3g02365 350 Gene3D - 183 321 - -
Seca3g02365 350 FunFam alcohol dehydrogenase 1-like isoform X1 19 182 - -
Seca3g02365 350 SUPERFAMILY GroES-like 4 187 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02365 Seca-Chr3 42130399 42134157 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02365 1 327 Monolignol Biosynthesis Gene Families AT1G72680 25.836 1.32e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02365 K18857 - gmx:100783858 655.981