Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02364 ATGAATACATGTTATCAATGCTGTTGGCATGATGTTTTATTCAGGATTGTGGAGAGTGTAGGAGAGGGTGTGACCCATCTGGAACCAGGGGACCATGCCCTCCCTGTATTCACAGGAGAGTGTGGGGAATGCTCACATTGTAAGTCAGAGGAGAGCAACATGTGTAATCTGCTCAGGATCAACACTGATAGAGGTGTTATGATCAATGATAATGAGTCAAGATTCTCCATTAAGGGACAACCTATATACCATTTTGTGGGTACCTCTACATTCAGTGAATACACTGTCGCCCATGCTGGATGTGTTGCAAAGATCAACCCTGCTGCTCCCCTTGACAAAGTTTGTGTTCTCAGTTGTGGAATATGCACAGGTCTTGGTGCCACTATCAATGTTGCAAAACCAAAACCTGGTTCTTCTGTTGCTGTCTTTGGACTTGGAGCTGTTGGCCTTGCTGCTGCTGAAGGAGCAAGGGTTTCTGGTGCATCAAGAATCATTGGGGTTGATCTAGTTTCCAGCCGATTTGAACTTGCTAAGAAATTTGGGGTCAATGAGTTTGTGAACCCAAAAGATCATGATAAACCTGTACAACAGGTAATTGCTGAAATGACCGATGGAGGTGTGGATCGCGCTGTTGAATGTACTGGCGCCATCCAGGCCATGATCTCAGCATTCGAATGTGTCCATGATGGTTGGGGTGTTGCTGTGCTTGTTGGAGTGCCAAGCAAAGATGATGCATTCAAAACTCATCCTATGAATCTCTTGAATGAAAGGACTCTTAAGGGTACCTTCTATGGTAACTACAAACCCCGCACTGATCTTCCTAATGTTGTGGAGAAGTACATGAAAGGGGTAAGCTTATATATATGTTAA 870 0.4437 MNTCYQCCWHDVLFRIVESVGEGVTHLEPGDHALPVFTGECGECSHCKSEESNMCNLLRINTDRGVMINDNESRFSIKGQPIYHFVGTSTFSEYTVAHAGCVAKINPAAPLDKVCVLSCGICTGLGATINVAKPKPGSSVAVFGLGAVGLAAAEGARVSGASRIIGVDLVSSRFELAKKFGVNEFVNPKDHDKPVQQVIAEMTDGGVDRAVECTGAIQAMISAFECVHDGWGVAVLVGVPSKDDAFKTHPMNLLNERTLKGTFYGNYKPRTDLPNVVEKYMKGVSLYIC. 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02364 289 Gene3D - 16 283 - -
Seca3g02364 289 PANTHER ALCOHOL DEHYDROGENASE 13 282 - -
Seca3g02364 289 Pfam Alcohol dehydrogenase GroES-like domain 16 104 IPR013154 -
Seca3g02364 289 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 110 283 IPR036291 -
Seca3g02364 289 FunFam Alcohol dehydrogenase class-P 124 262 - -
Seca3g02364 289 Gene3D - 124 262 - -
Seca3g02364 289 SUPERFAMILY GroES-like 16 127 IPR011032 -
Seca3g02364 289 FunFam alcohol dehydrogenase 1-like isoform X1 6 123 - -
Seca3g02364 289 Pfam Zinc-binding dehydrogenase 147 277 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02364 Seca-Chr3 42097694 42100457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02364 16 268 Monolignol Biosynthesis Gene Families AT1G72680 27.451 1.32e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02364 K18857 - gmx:100801918 494.582