Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02312 ATGAGAGGGGATTGGAGGACTCATGAGACTAACTGTGGGGGTGGGAAGCTTTGGTTCAGTATCTTCGGCTCTGACTTCAAACACAAAAAGTCCCTTATAGACCATGTTCGTGCCTCTTGTAATGGACATGATCCACACATTGTTGAGAGCTGTGATCAACAGGACATATTAGCAGATGAAGATGAAGATGATAACAACAGCAACAACAATAAAGATGGAATGATATTTGAATTTATTTAA 240 0.4 MRGDWRTHETNCGGGKLWFSIFGSDFKHKKSLIDHVRASCNGHDPHIVESCDQQDILADEDEDDNNSNNNKDGMIFEFI. 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02312 79 PANTHER ZINC FINGER PROTEIN WIP2 2 64 IPR043584 GO:0003700|GO:0010468
Seca3g02312 79 MobiDBLite consensus disorder prediction 56 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02312 Seca-Chr3 40989852 40990091 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02312 1 66 C2H2 Transcription Factor Family AT3G57670 54.545 2.92e-17 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02312 - - adu:107490921 88.9669