Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02310 ATGAGAGGGGATTGGAGGACTCATGAGATTAACTGTGGGGGTGGGAAGCTTTGGTGTAGTATCTTCGGCTCTGATTTCAAACACAAAAAGTCCCTTAAAGACCATGTTCGTGCCTCTTGTGATGGACATGATCCACACACTGCTGAGAGCTGTGATCAACAGGACATATTAGCAGATGAAGAGAATGATGAATTAGATGGAGATGAAGATGAAGATGATAACAACAGCAACAACGGTCCTTTTAAAGACCATGTTCATGCCTCTGGTGATGGACATGATCCACACACTGTTGAGAGCTGTGATCAACAGGACACATTAGCAGATGAAGAGAATGATGAATTAGACGGAGATGAAGATGAAGATGAAGATGATTACAACAGCAACAACAATAACGCTGGAATCATATTTGATTTTAATTAA 420 0.4095 MRGDWRTHEINCGGGKLWCSIFGSDFKHKKSLKDHVRASCDGHDPHTAESCDQQDILADEENDELDGDEDEDDNNSNNGPFKDHVHASGDGHDPHTVESCDQQDTLADEENDELDGDEDEDEDDYNSNNNNAGIIFDFN. 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02310 139 PANTHER ZINC FINGER PROTEIN WIP2 2 64 IPR043584 GO:0003700|GO:0010468
Seca3g02310 139 MobiDBLite consensus disorder prediction 33 139 - -
Seca3g02310 139 MobiDBLite consensus disorder prediction 75 99 - -
Seca3g02310 139 MobiDBLite consensus disorder prediction 103 126 - -
Seca3g02310 139 MobiDBLite consensus disorder prediction 33 50 - -
Seca3g02310 139 MobiDBLite consensus disorder prediction 54 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02310 Seca-Chr3 40984040 40985786 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02310 1 49 C2H2 Transcription Factor Family AT1G13290 69.388 3.68e-16 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02310 - - aprc:113870355 95.9005