Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02308 ATGAGAGGGTATTGGAGGACTCATGAGATTAACTGTGGGGGTGGGAAGCTTTGGTTCAGTATCTTCGGCTCTGATTTCAAACACAAAAAGTCCCTTAAAGACTATGTTCGTGCCTCTTGTGATGGACATGATCCACACACTGTTGAGAGCTGTGATCAACAGGACATATTAGCAGATGAAGAGAATGATGAATTAGACGGAGATGAAAATGAAGATGAAGATGATTACAACAACAACAACAATAACGCTGGATTGATATTTGATTTTAATTAA 273 0.3883 MRGYWRTHEINCGGGKLWFSIFGSDFKHKKSLKDYVRASCDGHDPHTVESCDQQDILADEENDELDGDENEDEDDYNNNNNNAGLIFDFN. 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02308 90 MobiDBLite consensus disorder prediction 54 76 - -
Seca3g02308 90 MobiDBLite consensus disorder prediction 46 90 - -
Seca3g02308 90 PANTHER ZINC FINGER PROTEIN WIP2 2 64 IPR043584 GO:0003700|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02308 Seca-Chr3 40946685 40946957 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02308 1 49 C2H2 Transcription Factor Family AT1G13290 69.388 1.81e-16 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02308 - - aprc:113870355 88.1965