Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02306 ATGAGAGGGGATTGGAGGACTCATGAGATTAACTGTGTGGGTGGGAAGCTTTGGTTCAGTATCTTCGGCTCTGATTTCAAACACAAAAAGTCCCTTAAAGACCATGTTCGTGCCTCTTGTGATGGACATGATCCACACACTGCTGAGAGTTGTGATCAACAGGACATATTAGCAGATGAAGAGAATGATGAATTAGATGGAGATGAAGATGAAGATGATAACAACAGCAACAACGATAAAGATGGAATGAAATTTGATTTTATTTAA 267 0.3933 MRGDWRTHEINCVGGKLWFSIFGSDFKHKKSLKDHVRASCDGHDPHTAESCDQQDILADEENDELDGDEDEDDNNSNNDKDGMKFDFI. 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02306 88 MobiDBLite consensus disorder prediction 41 88 - -
Seca3g02306 88 MobiDBLite consensus disorder prediction 54 76 - -
Seca3g02306 88 PANTHER ZINC FINGER PROTEIN WIP2 2 64 IPR043584 GO:0003700|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02306 Seca-Chr3 40945214 40945480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02306 1 47 C2H2 Transcription Factor Family AT1G13290 74.468 7.87e-18 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02306 - - aprc:113870355 93.2041