Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02302 ATGGAGACAAACAGTGAAATGAAAGCTAAGGTTCTTGCATTGAATGTCAGAAGAATACTAAAAACAAAGGTTCTTGCATTAGATAAGACTGTCACTTCTGGCATTATATGCAAGATCCTTGGCTTTCATTTCACTGTTTATCTCCATCTTCTCGCACTCCCTCTTGCTCAGAGACAACAGACAAAAGCTTATGAGAAGAACTGTGGGAAGATTTACTTTTGTATATGTGGCTCTGATTTCAAATACAATTGGTCCTTCAAAGACCATGTTCTTGCCTTTGGTGATGGATATGCTCCTCACACTGTTGAGATTTGTGATAAACAAGAAATATTAGAGGGTGAAGAAGATGATGAATTAGAAGGAGTAGAAGATGAAGATGATCACAACAGCAACAATAATCACAGTGGAAGGATCTTTCAACAGTGTGTGGATCATGTCCATCACAAAGGCACGAACATTGTCTTTAAGGGACTTTTTGTGTTTGAAATCAGAGCCGAAGATACTAAACCAAAGCTTCCCATCCCCACAGTTAATCTCATGAGTCCTCCAATACCCCCTCACAACAAAGGGTTTTTGCAGGTATTCAATTCATATGCCTTTTTATCTAAACTAGATTTCCCCCAAACTAATCTAGAAGACTATTAA 645 0.3814 METNSEMKAKVLALNVRRILKTKVLALDKTVTSGIICKILGFHFTVYLHLLALPLAQRQQTKAYEKNCGKIYFCICGSDFKYNWSFKDHVLAFGDGYAPHTVEICDKQEILEGEEDDELEGVEDEDDHNSNNNHSGRIFQQCVDHVHHKGTNIVFKGLFVFEIRAEDTKPKLPIPTVNLMSPPIPPHNKGFLQVFNSYAFLSKLDFPQTNLEDY. 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02302 214 PANTHER ZINC FINGER PROTEIN WIP2 56 126 IPR043584 GO:0003700|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02302 Seca-Chr3 40937856 40939982 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02302 55 103 C2H2 Transcription Factor Family AT1G13290 61.224 2.83e-15 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02302 - - adu:107490921 88.1965