Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02285 ATGCAGCTATATCATCATCCATTTGATTTGGACAGTCAGAAGGTGAGACTTGCTTTGGAAGAGAAAGGCACTGATTATACATCTCACCATGTCAATCCCATAACTGGCAAGAACTTGGATTCCTCATTCTTCAAGATGAATCCTAGTGGAAGACTCCCTGTTTTCCAAAATGGCTCTCACATCATTTACAAGCCTATTGATATAATCCAGTACATAGAAAGAATTGCTGTGATCTCCTCAGGGTCTGAGGTTATCAGTACTAGTAGTAGGGAAGTGATTGAATGGATGCAGAAGATACAAGAGTGGGATCCTAGGTTTTTTACCCTTTCCCATATACCAGAGAAATACCGGATTTATGTTTCCAAGTTCATAAGGCAGGTGTTGATAGCCCGTATGTCTGAGTCCCCTGAATTAGCAGGTGCTTACCATAAGAAGTTAAGAGAAGCCTATCAAACTGAAGAAAAATTGAAAGACCCAGATGTTTTGAGAAGGAGCAAGGAGCATTTGGTTAGACTGCTAGATGAAGCAGAGAGGCAGCTGAGTGAAACACCTTATTTAGCAGGTGAAGAGTTTACCATGGCTGATGTAATGCTCATTCCAATGTTGGCTCGTTTAGTACTCTTGGATTTAGAGAATGATTACATAACTAGCAGGCCAAACATTGCTGAGTATTGGGTTATGGTTCAGCAGAGGCCTAGTTATAGAAAGGTGATTGCTAAGCATTTTGATGGTTGGAGAAAGCACAAAACATTATTTAAAACTTGGTGTTTTGTTCGGATTAGAAGTTTGCTGAAGAGGTACTAG 804 0.403 MQLYHHPFDLDSQKVRLALEEKGTDYTSHHVNPITGKNLDSSFFKMNPSGRLPVFQNGSHIIYKPIDIIQYIERIAVISSGSEVISTSSREVIEWMQKIQEWDPRFFTLSHIPEKYRIYVSKFIRQVLIARMSESPELAGAYHKKLREAYQTEEKLKDPDVLRRSKEHLVRLLDEAERQLSETPYLAGEEFTMADVMLIPMLARLVLLDLENDYITSRPNIAEYWVMVQQRPSYRKVIAKHFDGWRKHKTLFKTWCFVRIRSLLKRY. 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02285 267 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 267 IPR044617 GO:0004364
Seca3g02285 267 CDD GST_N_family 1 73 - -
Seca3g02285 267 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 92 252 IPR010987 -
Seca3g02285 267 Pfam Glutathione S-transferase, C-terminal domain 161 224 - -
Seca3g02285 267 SUPERFAMILY Thioredoxin-like 1 74 IPR036249 -
Seca3g02285 267 SUPERFAMILY GST C-terminal domain-like 146 241 IPR036282 -
Seca3g02285 267 Pfam Glutathione S-transferase, N-terminal domain 1 74 IPR004045 -
Seca3g02285 267 Gene3D - 135 238 - -
Seca3g02285 267 CDD GST_C_family 147 225 - -
Seca3g02285 267 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
Seca3g02285 267 Gene3D Glutaredoxin 1 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02285 Seca-Chr3 40490639 40492697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02285 1 267 Glutathione S-transferase Gene Family AT1G77290 68.539 2.39e-142 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02285 K22077 - gmx:100792543 486.493