Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02200 ATGGATGGACTAGGTTCCAAGACAAAGCCTTTGAGTGAGCAATCAGAATCTTCCCAGAAGGCACAGAAGACCGATGGGAGAAAGTTGCTCGTCATGTTCCCGGCCAGTCACCAGCAAAGGTCAATGAACACTATGATGACTATCTCCATGACATTGCATCGATTGAGTCAGGTTGAAGTGAACAAATCAACCACCATTCTTACCTTTTTCCCATCTCCACCCACGGTTCATCTCGCTCCCTTCCGGTCATCTCAATTGCATGAAGACAACAGTCATAGAAAGATAAATGGATGGACTAGGTTCCAAGACAAAGCCTTTGAGCGAGCAATCAGAATCTTCCCAGAAGGCACAGAAGACCGATGGGAGAAAGTTGCTCGTCATGTTCCCGGCCAGTCACCAGCAAAGGTCAAGGAGCACTATGATGACTATCTCCATGACATTGCATCGATTGAGTCAGGTAACGTTGAGTTGCCAGATTACTTAGATGATTTAGTTTCAAAATCAACAATAGAAGATGATGGGCCTAGAGAGAAGACCCTTCTCCTTGCGGCAAGAAAACGATGCAATATTGGACTAAAGAGGAACACGGGGATCATCAACTTGACAAGTAATAACACAACAAGAGCAGATGTCAAAGTGGGTGATGGTTTCACCAAGGAGCATGCAGCAGAAGCACCAGAAGAAATCCCACTAACAGGGCCATTTGCAGGAGAGAATCCCGGAAGCCCTGTTGCAGGCACCAGTGAGGATTTGGGTGATGTCAGACCAGTTCCATCTGACTGCGGTGATGGTGCCGGCGCTGGTCCAAATACCGATTCCCTCTGA 825 0.4727 MDGLGSKTKPLSEQSESSQKAQKTDGRKLLVMFPASHQQRSMNTMMTISMTLHRLSQVEVNKSTTILTFFPSPPTVHLAPFRSSQLHEDNSHRKINGWTRFQDKAFERAIRIFPEGTEDRWEKVARHVPGQSPAKVKEHYDDYLHDIASIESGNVELPDYLDDLVSKSTIEDDGPREKTLLLAARKRCNIGLKRNTGIINLTSNNTTRADVKVGDGFTKEHAAEAPEEIPLTGPFAGENPGSPVAGTSEDLGDVRPVPSDCGDGAGAGPNTDSL. 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02200 274 ProSiteProfiles Myb-like domain profile. 90 144 IPR001005 -
Seca3g02200 274 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 90 166 IPR044636 GO:0003700
Seca3g02200 274 FunFam Transcription factor SRM1 90 157 - -
Seca3g02200 274 MobiDBLite consensus disorder prediction 221 274 - -
Seca3g02200 274 Gene3D - 90 157 - -
Seca3g02200 274 MobiDBLite consensus disorder prediction 1 28 - -
Seca3g02200 274 SMART sant 94 146 IPR001005 -
Seca3g02200 274 CDD SANT 98 144 IPR001005 -
Seca3g02200 274 SUPERFAMILY Homeodomain-like 97 152 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02200 Seca-Chr3 39030084 39034846 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Seca3g02200 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02200 - - psom:113313471 97.8265