Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02187 GAAGAGGAGGAAGCTTATTTCTTTATATTTCTTCAACAAGTAGTGATTAGTCCTATTTGCAGGATCAATGAATCTGCCAACAAATCCATAAGAACTGAAATGATGATGTCCCTTAGGTCTACAACTTCTACTACAAAGGTTGAAGTGCTAAGTTGCATAAGGCATCCAAACATGGTTCTCCTCCTTAGAGCTTGCCCTGAGTATGGTTGCCTAGTGTATGAATACATGGCTAATAGAAGCTTGGATGAGTGTCTCTTCCGGTGGGAAAGACAGATGGTGAAAATTCATTTCCAGCATCCAAAGTTGTTTTTGTTGGAGGCTCACAATCATGATTTGTGCAGGGAAGCTAAACTTATAGAGCGTGCCAAAGCTCTTAAAGTAAATGCTGGAACTGAACCTGATACAGACCTTGGTCCTGTCATCAGCAAACAGGCTAAGGAGAGAATACACAAATTAGTTCAATCTGGGGTTGAAAGTGGTGCCAAACTACTGCTTGATGGAAGAAATATAGTGGTACAATTTATTTCCTCAACTGCCTTATTCAAACATTCTGGTTGA 558 0.4014 EEEEAYFFIFLQQVVISPICRINESANKSIRTEMMMSLRSTTSTTKVEVLSCIRHPNMVLLLRACPEYGCLVYEYMANRSLDECLFRWERQMVKIHFQHPKLFLLEAHNHDLCREAKLIERAKALKVNAGTEPDTDLGPVISKQAKERIHKLVQSGVESGAKLLLDGRNIVVQFISSTALFKHSG. 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02187 185 Gene3D Transferase(Phosphotransferase) domain 1 24 99 - -
Seca3g02187 185 SUPERFAMILY Protein kinase-like (PK-like) 28 90 IPR011009 -
Seca3g02187 185 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 116 180 IPR016163 GO:0016620
Seca3g02187 185 SUPERFAMILY ALDH-like 116 171 IPR016161 GO:0016491
Seca3g02187 185 Pfam Aldehyde dehydrogenase family 116 168 IPR015590 GO:0016491
Seca3g02187 185 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 115 174 IPR010061 GO:0004491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02187 Seca-Chr3 38943438 38945066 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02187 115 180 Aldehyde Dehydrogenase Gene Family AT2G14170 69.444 3.65e-24 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02187 K00140 - gmx:100811544 107.457