Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02176 ATGACAAAGGCAAAGCCTTATTTGTTATCGGTGGGATTGCAATTTGGGTTCGCAGGAGCATACATATTCTCCATGGCCAGTCTCAATCATGGAATGAATCGTTTTGTGTTCATTGTTTATCGCAATGCCATTGCTGCATTAGCCCTCGCTCCTTTTGCATTCATTTTTGAAAGGAAAATTAGGCCAAAGATGACAATCACTGTCTTTATGCAGATAATGGCGCTCGCATTTTTGGAGCCAGTGATTGACCAAGGATTCACTTTCTTGGGAATGCAATATACCTCAGCATCATTTGCATCTGCTTTGATTAATGCTGTTCCCTCTGTCACCTTTGTGCTAGCCGTTATTCTCAGGTTAGAGCGTATAGATATGAAGAAGATACGGAGCGTAGCGAAGGTGATGGGGACGTTGGTAACCTTTGGAGGCGCTTTGTTAATGACACTTTACAAAGGCCCTCAAATTCACCTTTTCTATTCTCCGAATACAACCCAGCAACATGGAACTCACTCCCCTCAGCCTCTCAAACACTGGCTATCTGGCACTCTCTTTCTACTCCTCGGTTGTGTCGCTTGGTCATCTTTCTTCATTTTACAGGCAATTACTATATATTATTATTATTTTTTACAAATGTCACTGTCCTCGTTGATATGCGTAGTGGGTGCTGTGCAAGCTTTCCTGGTGGCACTGGTGGCGGAGCATCACGCTGGGATTTCCGCATGGGCCATTGGTTGGGACTTTAGGCTCTTTGGTCCTCTATACACGGGAATAGTCACCTCAGGAATTACATATTATGCACAAGGGTTGGTATTGCAAAGCAGAGGCCCAGTATTCCTCACAGCTTTTAATCCCCTTTGCATGGTTATCACTTCTGCTTTAGGATCCTTCCTTTTCGGAGAGCAACTTCACTTGGGCAGTATCATTGGAGCGATCATTATCGCAATGGGTCTTTATTCTGTGGTGTGGGGTAAAGGCAAAGACCATTCAGACACCACGCCACCATCGCCTACAGCAAAGCAAACAGAGACACAACAGCTGCCAATTACTTCATCTGAAATTGCCTAA 1062 0.4444 MTKAKPYLLSVGLQFGFAGAYIFSMASLNHGMNRFVFIVYRNAIAALALAPFAFIFERKIRPKMTITVFMQIMALAFLEPVIDQGFTFLGMQYTSASFASALINAVPSVTFVLAVILRLERIDMKKIRSVAKVMGTLVTFGGALLMTLYKGPQIHLFYSPNTTQQHGTHSPQPLKHWLSGTLFLLLGCVAWSSFFILQAITIYYYYFLQMSLSSLICVVGAVQAFLVALVAEHHAGISAWAIGWDFRLFGPLYTGIVTSGITYYAQGLVLQSRGPVFLTAFNPLCMVITSALGSFLFGEQLHLGSIIGAIIIAMGLYSVVWGKGKDHSDTTPPSPTAKQTETQQLPITSSEIA. 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02176 353 PANTHER WAT1-RELATED PROTEIN 6 331 IPR030184 GO:0016020|GO:0022857
Seca3g02176 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 150 - -
Seca3g02176 353 MobiDBLite consensus disorder prediction 327 353 - -
Seca3g02176 353 Pfam EamA-like transporter family 179 320 IPR000620 GO:0016020
Seca3g02176 353 Pfam EamA-like transporter family 9 147 IPR000620 GO:0016020
Seca3g02176 353 MobiDBLite consensus disorder prediction 329 353 - -
Seca3g02176 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 225 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02176 Seca-Chr3 38607513 38612399 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02176 1 349 Nodulin-like Gene Family AT1G44800 46.418 8.39e-115 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02176 - - gmx:100812537 554.288