Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02174 ATGGATATGGATCCTTTCAATTCTCAAAATATGAATATGCAAGCTGATCTAATTTTAAATAATTTACCGGTAATACATTCTGACTCTCTTGATGACATGTCACAATCTACTGTTGTTGATGAACTTCATGTCGAGCCTTATGTTGGGATGCAATTTAATTCATTAGAAGAAGTCGTAGAATGTTATAATTCATTTGCAAAGGCGAAAGGATTTGGGATTCGTATTCGCTCTAGTAAAAAGAATTATTGCATTTTAGTATGTGTTAGGGAAGGTGAACGTCCGGTGAAAAGTGATAAAAATGAAAAGGATAATGGCATCATGAGAGAAGTTAAGAGAAAATGCTCAACCATGCGCATGGGATGTCAAGCATCACTTACTGTGTCAAAGGATGTGAAACGAGATAGATGGGTTATAAAATATTTTGATAATAATCATAATCATGTCATGGCTAGTCCTAAGAGTGTCTTATTTGAGGTGTCATAA 483 0.3437 MDMDPFNSQNMNMQADLILNNLPVIHSDSLDDMSQSTVVDELHVEPYVGMQFNSLEEVVECYNSFAKAKGFGIRIRSSKKNYCILVCVREGERPVKSDKNEKDNGIMREVKRKCSTMRMGCQASLTVSKDVKRDRWVIKYFDNNHNHVMASPKSVLFEVS. 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02174 160 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 24 153 - -
Seca3g02174 160 Pfam FAR1 DNA-binding domain 61 149 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02174 Seca-Chr3 38520008 38520490 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g02174 FAR1 1.4e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02174 - - tpra:123886791 131.724