Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02173 ATGACCATGATGAGTACTGAAAATTTGATTCACAGATTAGGCCTGCTATTTACTAATGCAAAACCATATCTGTTAATGATTGGTTTGCAATTTGGCATGGCCGGAAATTACATCTTCGGAAAGGACATTCTTAACCGTGGGATGAGTCGTTTTGTGTTTATTGTCTATCGTAATGCCATGGCTACCATTGCCCTTGCTCCTTTCGCATTCATTCTTGAAAGGAAAAGTAGACCCAAGATGACGCTTCCCGTCTTTCTACAGATAATGGTCCTTGGATTTCTAGAGCCAGTTTTTAACCAAAGCTTCACTTACTTGGGGATGAAGTACACTTCTGCTTCATTCACATCTGCTATTATGAATGCTGTTCCCTCTATCACCTTTCTCCTTGCAGTCATCCTCCGGTTGGAGCGTCTTAAATTGAAGGAGATTAGGAGTGAAGCCAAAGTGATTGGAACATTGGTGACCTTTGGAGGTGCTTTGCTAATGGCAATTTACAAAGGTCCTGGATTCAACCTTTTTCATTCAGGAAACACAAGCCACCATGAAGATGGAAGCCACTCATCATCCTCTCATACCAACCACCAAACCACTGGAGCTCTTTACATACTAATGGGTTGTGTGGCTTTGTCATCTTTCTACATTCTACAGTGTGTGAGGTTTCGTGTCTTATGTGGATTTGCTATATTAATTGTTGTGGGAAACGGCAGTCAGTAA 714 0.416 MTMMSTENLIHRLGLLFTNAKPYLLMIGLQFGMAGNYIFGKDILNRGMSRFVFIVYRNAMATIALAPFAFILERKSRPKMTLPVFLQIMVLGFLEPVFNQSFTYLGMKYTSASFTSAIMNAVPSITFLLAVILRLERLKLKEIRSEAKVIGTLVTFGGALLMAIYKGPGFNLFHSGNTSHHEDGSHSSSSHTNHQTTGALYILMGCVALSSFYILQCVRFRVLCGFAILIVVGNGSQ. 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02173 237 Pfam EamA-like transporter family 21 162 IPR000620 GO:0016020
Seca3g02173 237 PANTHER WAT1-RELATED PROTEIN 21 217 IPR030184 GO:0016020|GO:0022857
Seca3g02173 237 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02173 Seca-Chr3 38514098 38518220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02173 21 221 Nodulin-like Gene Family AT4G08290 55.224 1.97e-76 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02173 - - gmx:100786326 331.643