Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02139 ATGAGCAAACCCAAAACCCACAGAAAACCAACCATTACCAAGCATGTCAGCCAAAACCAAAACCAACAGCCACAGAAAACAGAGAAACAACCTTCATGGTCAGTGGTAAGAGGACTATTGGCTTGTAGAAATGTCCAAGTTCAGCAGCAGCAGCAGCAGAAGGAAGCAAAACCGCAACCGGTGCCATCAGAACCAAAACAACCAAGGAAAAAACAGGAACAGAGAAAGCTGCAAGAGGAACGAGTCCCAGAAGAAAACAGCAAGAAATGCAAGAAGATGAAGTGTTCAGGTTCGCTCTGTAACAACACAGGGGTCATGGCAAAGCCTGAAACAGGAACTCAAGATATTCACAAGAAGAAGGTGTCAATGGGTGGATGCAAAAATAATGATGCTTCTAGCAGATCCATGAAAGCTCCTCTGAATGAACTCAATGGAGTTGTGTCAGCCTCTTCTTCTTCTTCATTGTCAGCATCTTCTAATTCTTCTGCTGGTGGGTCTTTCAGGACAATGCCATTCAGGAGACTCTCCGGTTGTTATGAGTGCCGAATGGTGGTAGACCCTGTTCTGGGTTTCACCAGAGACCCTTCTCTAAGGAGTACCATTTGTTCTTGTCCTGACTGTGGTGAGATCATGAAAGCTGAAAACTTGGAACATCATCAAGCTGTCAAACATGCAGTTTCTGAACTGGGTCCAGAAGATACTAGCAAGAACATAGTTGAAATTATATTCCACTCTAGCTGGCTAAAGAAACAATCACCAGTGTGCAAAATTGACCGCATCCTAAAAGTCCACAATACCCAGAAGACAATAAGCAAATTCGAAGAGTACAGAGACTCAATCAAATCCAAAGCCACGAAGCTCTCCAAGAAACACCCACGTTGCATAGCAGATGGCAATGAGCTACTAAGGTTTTACTGCACCACCTTCGTGTGTTCACTAGGCCTAAATGGGTCCTCCAATCTCTGCAACTCAACGTCACAATGCAATGTCTGTAGCATAATCAAACACGGATTCAAGTTGAGTGGAGGAAATGGTATATTGACAACGGCGACAAGTGGGAAGGCCCATGACAAAGCGTGTGTTACAGTTTCAGCGGATGAGAGTGAGGACAAGAGGGCAATGCTGGTTTGTCGGGTGATAGCAGGCAGGGTGAAGAAGAACACAGAAGGGGGTATGGAAGAGTATGATTCGGTTGCAGGGGCTGTTGGGGCTTATTCTAATTTGGATGAGTTGTATGTGTTCAACCCGCGAGCTATATTGCCTTGCTTTGTTGTAATCTATAGAGACTTCTGA 1293 0.4486 MSKPKTHRKPTITKHVSQNQNQQPQKTEKQPSWSVVRGLLACRNVQVQQQQQQKEAKPQPVPSEPKQPRKKQEQRKLQEERVPEENSKKCKKMKCSGSLCNNTGVMAKPETGTQDIHKKKVSMGGCKNNDASSRSMKAPLNELNGVVSASSSSSLSASSNSSAGGSFRTMPFRRLSGCYECRMVVDPVLGFTRDPSLRSTICSCPDCGEIMKAENLEHHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKKQSPVCKIDRILKVHNTQKTISKFEEYRDSIKSKATKLSKKHPRCIADGNELLRFYCTTFVCSLGLNGSSNLCNSTSQCNVCSIIKHGFKLSGGNGILTTATSGKAHDKACVTVSADESEDKRAMLVCRVIAGRVKKNTEGGMEEYDSVAGAVGAYSNLDELYVFNPRAILPCFVVIYRDF. 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02139 430 MobiDBLite consensus disorder prediction 43 58 - -
Seca3g02139 430 MobiDBLite consensus disorder prediction 64 88 - -
Seca3g02139 430 MobiDBLite consensus disorder prediction 13 32 - -
Seca3g02139 430 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 92 427 - -
Seca3g02139 430 Gene3D - 224 429 - -
Seca3g02139 430 SUPERFAMILY ADP-ribosylation 226 429 - -
Seca3g02139 430 MobiDBLite consensus disorder prediction 111 133 - -
Seca3g02139 430 MobiDBLite consensus disorder prediction 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02139 Seca-Chr3 37989233 37991388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02139 29 428 C2H2 Transcription Factor Family AT1G75710 40.363 2.91e-88 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02139 - - gmx:100817333 677.937