Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02126 ATGAGGCAATTGGTTTGTAACAAAGAGGGAGAGAGAAGTGAGAAGCATCTTAATAGGACTGATAGAATTAGGGAGGCAAAGGCCTTGGCACGAACTAAGTGTAATGCAAGGCTTTGTATTTCCTTAGATTATAGAAGTAGAAAGTTGAGGGTTGGAATCTTTGAGCCAGCTCACAACCATGAATTGACTCCTGCAAGTATGATACATTTGCTACCTGCTTATCGTGGGTTGAATGTAGCTGATAAGGCACAGGTTGACGGTCTACATCATTATGGTGTTAGGACTTGTCATATAATGGGTCTTATAATGGGTCAGAAGGGAGGCTATTCTGATCTTGGTTTTTGTAAGAAGGATTTGTACAATCATATTGATAAAGAGAATCGGGCAAAAATAGAGGATGGGGATGCTTTTGAGGCATTGTGTTACCTTCAATCAAAGTTTGACAACAATTCAATGACATTTATAAAGATTACAACCACTGAAGATCATAAACTTGAAAACTTGTTTTGGTCTGATGTAGGGAGTAGAATTGATTATATTTGTTTCGGGATGTAG 555 0.382 MRQLVCNKEGERSEKHLNRTDRIREAKALARTKCNARLCISLDYRSRKLRVGIFEPAHNHELTPASMIHLLPAYRGLNVADKAQVDGLHHYGVRTCHIMGLIMGQKGGYSDLGFCKKDLYNHIDKENRAKIEDGDAFEALCYLQSKFDNNSMTFIKITTTEDHKLENLFWSDVGSRIDYICFGM. 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02126 184 PANTHER OS01G0519700 PROTEIN 2 183 - -
Seca3g02126 184 Pfam FAR1 DNA-binding domain 2 63 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02126 Seca-Chr3 37605066 37605620 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g02126 FAR1 2.2e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02126 - - tpra:123905367 209.149