Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02116 ATGAATTCAAAAAAACTTAATTGTGTAATTATAGTTTTAGTCATATATTTGGTGAGTCAAAATGCTCATTCTCAGTTACAGGTTGGGTTTTACAGCTATTCATGTGGCATGGCTGAGTTCATTGTAAAGAATGAGGTCAGAAAAGCTTTCAACAAGAATCCTGGAATTGCTGCTGGGCTTGTGAGGATGCATTTTCATGATTGCTTTATTAGAGGGTGTGATGCATCGGTGCTTCTTGATTCCACTCCCTCAAACACTGCAGAGAAAGACTCTCCAGCCAATAAACCAAGTCTTCGAGGGTTTGAAGTCATTGATAATGCTAAGGCTAGACTTGAAGCAGTGTGCAAAGGAATTGTTTCTTGTGCTGACATAGTTGCATTTGCAGCAAGGGATAGTGTGGAATTAGCTGGAGGGCTTGGCTATGATGTTCCTGCAGGAAGAAGAGATGGCAGAATATCACTAGCTTCAGATACAAGAACAGACTTACCTCCTCCAACTTTCAATGTTAAACAACTAACTCAACTCTTTGCAAAGAAGGGTTTAACACAGGAAGAAATGGTCACTCTCTCTGGTATGAGCTTCAAGATAACTATTTTTGTTGGTTTGCTTGTATAG 615 0.3967 MNSKKLNCVIIVLVIYLVSQNAHSQLQVGFYSYSCGMAEFIVKNEVRKAFNKNPGIAAGLVRMHFHDCFIRGCDASVLLDSTPSNTAEKDSPANKPSLRGFEVIDNAKARLEAVCKGIVSCADIVAFAARDSVELAGGLGYDVPAGRRDGRISLASDTRTDLPPPTFNVKQLTQLFAKKGLTQEEMVTLSGMSFKITIFVGLLV. 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02116 204 FunFam Peroxidase 29 175 - -
Seca3g02116 204 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g02116 204 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g02116 204 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g02116 204 ProSiteProfiles Plant heme peroxidase family profile. 25 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g02116 204 PANTHER PEROXIDASE 25-RELATED 14 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g02116 204 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Seca3g02116 204 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g02116 204 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g02116 204 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g02116 204 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g02116 204 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g02116 204 Gene3D - 29 162 - -
Seca3g02116 204 SUPERFAMILY Heme-dependent peroxidases 25 191 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca3g02116 204 CDD secretory_peroxidase 25 191 IPR033905 GO:0004601|GO:0042744
Seca3g02116 204 Gene3D Peroxidase, domain 2 163 192 - -
Seca3g02116 204 Pfam Peroxidase 42 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02116 Seca-Chr3 37472155 37474214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02116 1 191 Peroxidase AT5G42180 53.403 1.41e-63 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02116 K00430 - gmx:100779031 326.635