Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02087 ATGTGGAGATATTTTTCTGCATTTGGTTGGTTTAACAATAGTTGTTTTAAATGCTTGCTCAGGGGTTTCACCAAGTTTAGTCATACTGATTATCTCAAGTTCAAGTCAGAGAACAGAATTGTCCCTGATGGTGTGAATGCAAAGCTTCTTGGGTGTCATGGACCATTGGCAAATCGTCAACCTGGAAGAGCTTTTCTCTCAAGTGCTACTACGTAG 216 0.4028 MWRYFSAFGWFNNSCFKCLLRGFTKFSHTDYLKFKSENRIVPDGVNAKLLGCHGPLANRQPGRAFLSSATT. 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02087 71 Gene3D - 26 64 - -
Seca3g02087 71 PANTHER 60S RIBOSOMAL PROTEIN L10 22 63 IPR001197 GO:0003735|GO:0005840|GO:0006412
Seca3g02087 71 FunFam 60S ribosomal protein L10, putative 25 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02087 Seca-Chr3 36668197 36668843 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02087 22 71 Cytoplasmic Ribosomal Protein Gene Family AT1G26910 70.000 5.05e-21 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02087 K02866 - gmx:100305619 97.0561