Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02066 ATGGAAGAGGTAATTAATTGTATTCGCCGAGCTTGTGAATTAGCTCAAAACCTTGAATCAGACTTACCCAACTTGGCTAACCAGCCTTCTATGCTGTCCTTGTCCATTGATGAGATAGTTGAGACACTGAGTGGTGCCAAAGGAAGGTTATTAAAAATCTACCGACAGGACCAAAAATCAGCATCTTCATCATTTGCTGAAATGGATGCAACAAGTCTAATGCGGGAATGGCTCGGGTGGGGTTATGTTGGTCAGTTGTCTCAAATGCAGCAGCTAATTCAAGTTGTGAGGGGTACCACATCGGGTGATGTGCGGATTGGTGAAATGGGAGGGAGAAATGTGGTGGATTCTGAGAGATTGAAAGCATCTGAAGGAGGGGTGCAGGTGATTGATGTTGAAGCATCACCCTCACGACCACGAAGATTAAGCAGAAACATTGACCTGGAGAAAAATAAAATGATGGTTCCTGCACCCCAGTTTGGCAACAAAGAAATGCCGCCAGAGGATGGCTTCACTTGGAGAAAATATGGCCAGAAACAGATACTTGGCTCCAAGTACCCAAGGAGTTACTACAGGTGCACATACCAGAAATTATATGAATGCAAAGCCAAGAAGCAAGTGCAGCGACATGATCACAATCATAACATATTTGAGGTAACATACAGAGGGAACCACACTTGCCAAATGTCCTCCACAGCACCTTCATCATCAGTTCAACCACAACAACTACTTTTGGAAAGTGGCATTTCCTCGTCTTCAGGTTCCGGCCGGTGGTTGTCATCGAGGGTGAACCTCAGCCTCCATGCTGATGGCGGTGGTGGCAGTGGTGGAGCCTCCACTACCAGTTCAAGATATGGTGCTGATTATCCTGTGGTGGATATGGCCGATGTTATGTTCAAATATACTCCCTCCATTCCAAAACTCTTGTTGTTTTAG 936 0.4551 MEEVINCIRRACELAQNLESDLPNLANQPSMLSLSIDEIVETLSGAKGRLLKIYRQDQKSASSSFAEMDATSLMREWLGWGYVGQLSQMQQLIQVVRGTTSGDVRIGEMGGRNVVDSERLKASEGGVQVIDVEASPSRPRRLSRNIDLEKNKMMVPAPQFGNKEMPPEDGFTWRKYGQKQILGSKYPRSYYRCTYQKLYECKAKKQVQRHDHNHNIFEVTYRGNHTCQMSSTAPSSSVQPQQLLLESGISSSSGSGRWLSSRVNLSLHADGGGGSGGASTTSSRYGADYPVVDMADVMFKYTPSIPKLLLF. 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02066 311 SMART WRKY_cls 167 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca3g02066 311 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 8 241 IPR044810 GO:0003700
Seca3g02066 311 ProSiteProfiles WRKY domain profile. 168 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca3g02066 311 Pfam WRKY DNA -binding domain 168 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca3g02066 311 Coils Coil 8 28 - -
Seca3g02066 311 Gene3D WRKY domain 157 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca3g02066 311 SUPERFAMILY WRKY DNA-binding domain 165 229 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02066 Seca-Chr3 36391242 36397431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02066 1 280 WRKY Transcription Factor Family AT2G40740 34.812 5.80e-44 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca3g02066 WRKY 1.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02066 - - gsj:114410180 336.265