Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02060 ATGAAACAATGTTCCAAAGATGATAAGGAAGATAATTTTTCCAACCCTGATGAAAACACAAACACAAACACAAAGGGAAAGACTTTCACTTGCAACTTTTGCAATAAAAAGTTCGCTTGTCCACAAGCATTGGGAGGGCACCAAAACGCACATAGACAAGAGCGAGCACTTGCAAAACGTCTTGAATTCCTTGATTCTATTGGTGATTTTGAGCAACCCAACATTCCTCGTTATGGAGGACCCTTCATTAACAGGGCACTTGATGATTCAGTGATGCGGAAGCCTTCCTACCTTTGGGCCTCAAGTGGATTTAGTTATGGTGATTGTTGGTCTGGGCTTGGAATTATGGGAAGAGACGCAACTCCAATTACAAGGCCACTTTTCCCTAATGCTACTACCAAGTCATTACGTCATGTCATAAACAAACCAACTATGACAACAAGTGATTCCATGCCGGAAGAAACTTCCAATGTAGAATCTTCCAATGTTGATTTGGAACTTAAGCTTTAA 510 0.4078 MKQCSKDDKEDNFSNPDENTNTNTKGKTFTCNFCNKKFACPQALGGHQNAHRQERALAKRLEFLDSIGDFEQPNIPRYGGPFINRALDDSVMRKPSYLWASSGFSYGDCWSGLGIMGRDATPITRPLFPNATTKSLRHVINKPTMTTSDSMPEETSNVESSNVDLELKL. 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02060 169 MobiDBLite consensus disorder prediction 1 21 - -
Seca3g02060 169 MobiDBLite consensus disorder prediction 144 163 - -
Seca3g02060 169 ProSitePatterns Zinc finger C2H2 type domain signature. 31 51 IPR013087 -
Seca3g02060 169 MobiDBLite consensus disorder prediction 1 15 - -
Seca3g02060 169 MobiDBLite consensus disorder prediction 144 169 - -
Seca3g02060 169 ProSiteProfiles Zinc finger C2H2 type domain profile. 29 56 IPR013087 -
Seca3g02060 169 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 14 162 IPR044246 GO:0009788
Seca3g02060 169 SUPERFAMILY beta-beta-alpha zinc fingers 25 56 IPR036236 -
Seca3g02060 169 Gene3D Classic Zinc Finger 3 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02060 Seca-Chr3 36306289 36306798 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02060 10 120 C2H2 Transcription Factor Family AT5G10970 37.815 8.60e-16 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02060 - - aprc:113850616 97.4413