Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02050 ATGTCTCCTTTTGTGAGAAGTGTTTCCCTGTTGTGGGTGCTTATAATATTGCTTTCAACCAACAATATTGCTCTTGGAAAAACACATGTGAAGGTAGTAAATCATTTGACAGGCAATTTAGACTTAACCTTTCACTGCAAATCTGCGGATGATGATCTTGGAGTCAAACTGCTCCATCTTAATGAGTCGTGGGAATGGAGTTTTAAACCTGCCATAATCTTTAAGACCACACGATTCTATTGTCTCTTTCAATGGCAAGATAATGGTGGAATCCAACAGAAATGGTTTGATATATACATATCAAAGAGGGATGATTGCCAAACCTGTACTTGGTTTATAAGCCAAGATAAACCATGTATGTACCTTTCTGAAAATGTGAATGAATGCATGGAATGGAATCATTAA 405 0.3679 MSPFVRSVSLLWVLIILLSTNNIALGKTHVKVVNHLTGNLDLTFHCKSADDDLGVKLLHLNESWEWSFKPAIIFKTTRFYCLFQWQDNGGIQQKWFDIYISKRDDCQTCTWFISQDKPCMYLSENVNECMEWNH. 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02050 134 Pfam Plant self-incompatibility protein S1 29 132 IPR010264 -
Seca3g02050 134 PANTHER - 26 122 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02050 Seca-Chr3 36029101 36029505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02050 15 133 Carbohydrate Esterase AT3G16970 36.719 1.06e-20 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02050 - - cam:101513244 117.857