Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02041 ATGGATCTTGAACCTGGAAAGTGTTGGGATAACTCAAAGAAGGATTCTTGGAAGACTATTCTGCTTTTAGCCTATCAAAGCCTTGGTGTGGTATATGGGGACTTGGGTATTTCTCCATTGTATGTTTACACAAGCACCTTTGCTGAAGATATTGAACATTCAGAGACCAATGAAGAGATCTTTGGTGCCCTTTCTTTTGTTTTCTGGACTCTTACATTGATCCCACTGTTCAAATATGTGTTTGTGGTTCTTCGAGCTGATGATAATGGAGAGGGCGGTACATTTGCTCTATATTCCTTGATTTGTAGGCATGCAAAAGTGAGTCTTCTACCAAATAGACAACATGCTGATGAAGCGCTTTCTACATATAAGATGGAGGAGCCTCCAGAGAAGAATAATTCCAGAGTGAAGATGCTGCTTGAGAAGTATAAGGCCTTGCATACAGCACTGCTAGTTGTGGTTCTTCTTGGCACTTGTATGGTAATTGGGGATGGACTACTTACCCCAGCCATTTCTGTTTTCTCAGCAGTATCTGGTCTTGAGGTAAACATGTCCAAGAAACACCACCAGTATGCTGTGATTCCCATTACTTGCTTCATTCTGGTGTGTTTGTTTGCACTCCAACACTATGGTACACATCGGGTGGGATTCCTTTTTGCACCAGTTGTGCTGACATGGCTACTATGCATCAGTACACTTGGTTTATATAATATATTCAAATGGAATCCGCATGTATATAAAGCTCTTTCACCATATTACATGTTCAAGTTCTTAAAGAAGACAAGGATAAGTGGATGGATGTCTTTGGGTGGAATATTACTGTGCATAACAGGTAAAAGTAGAGAAATTCATGTATGTGATAAAATCTCATGTCTTGTGCTTTTCTCCTACATTTTCATTAAATCACAAACCGTGTCTATCTACAAAACACATATGTTGTGCAGCTGCTCAGAAGCTATGTTTGCTGATCTTGGCCATTTCTCATATATGGCCATTCAGATTGCATTTACCTTTCTGGTATATCCTGCGCTTATATTGGCATATATGGGTCAAGCTGCTTACTTGTCACAGCATCATGATTCTGATCTCCGAATCAGTTTCTATGTCTCAGTTCCAGCAAGCGTGAGGTGGCCAGTGCTTATCTTAGCTATTCTAGCTTCTGTTGTGGGAAGCCAAGCAATCATCAGTGGAACATTTTCTATCATAAACCAGAGCCAATCTCTAGGTTGCTTCCCAAGAGTTAAGGTTGTTCATACATCAGACAAGATACATGGTCAGGTCTACATCCCTGAAATTAATTGGATACTCATGATCCTCTGTATTGCTGTGACCATTGGATTTAGGGACACAAAACACATGGGAAATGCAGCAGGGTTAGCAGTGATGACCGTGATGCTGGTAACAACATGCCTTACTTCCCTAGTGATTATACTTTGTTGGCATAAACCCCCTATTGTAGCCCTTTGTTTCCTATTATTTTTTGGCTCTGTTGAGCTGCTATATTTCTCAGCTTCACTGACAAAGTTTTGTGAGGGTGCCTGGTTCCCTATCCTCCTTGCCCTCTTCCTTATGATTATAATGTTCCTTTGGCACTATGCAACAATCAAGAAATATGAATATGACCTTCACAACAAGGTATCTCTAGACTGGCTTCTAGCTTTAGGTCCAAGCTTGGGAGTTGCTAGAGTCCCTGGAATAGGCCTAGTGTTCACTGATCTCACCACTGGCATCCCAGCAAACTTCTCCCGCTTTGTCACCAACCTCCCTGCATATCACCGCATCCTTGTGTTTGTATGTGTAAAATCAGTGCCAGTTCCTCATGTCACTGCTGCTGAGAGGTACCTTGTAGGCCGTGTAGGACCTGCAGGTCATAGGTCCTACAGGTGTATAGTCAGATATGGATATAGAGATGTTCATCAAGATATTGATTCCTTTGAATCTGAACTAGTACAAATGCTTGCTGATTTTATCCAATATGATTGGTATAGAACAAGGAGGAATAGCATGAGCATTGATGATGATGCTTCACACTCTAATGAATCATCAAGTCACAGATTAACAGTAATTGGTACAACTGGTTTCTCCAGCCAACAAGGGTATGATACTGATCAGAGTGTGCAGCCAGCAAGTGTGTCTATTGGATTCCCAACTGTACAAAGTGTGACAGATGTTATTGAGATGGCACCAATGGATGTGACTGAGAGACGAGTGAGGTTTGCAATTGATGATGAGCCTGAAAGTGACACAAGGTCTGAAATAGGTGTGCAAATGCAGGAAGAGTTAGAAGATCTTCATGCTGCTCAAGAAGCCGGTATTGCATTCATTCTTGGACATTCTCATGTAAGAGCAAAACAAGGTTCGTCTCTCTTGAAGAAATTGGCCCTTAACTATGGTTACAATTTCTTGAGAAGGAATTGTCGAGGCCCTGATGTGGCACTTAAGGTTCCCCCAGTTTCTCTTTTGGAGGTTGGCATGGTTTATATTGTGTAG 2490 0.4161 MDLEPGKCWDNSKKDSWKTILLLAYQSLGVVYGDLGISPLYVYTSTFAEDIEHSETNEEIFGALSFVFWTLTLIPLFKYVFVVLRADDNGEGGTFALYSLICRHAKVSLLPNRQHADEALSTYKMEEPPEKNNSRVKMLLEKYKALHTALLVVVLLGTCMVIGDGLLTPAISVFSAVSGLEVNMSKKHHQYAVIPITCFILVCLFALQHYGTHRVGFLFAPVVLTWLLCISTLGLYNIFKWNPHVYKALSPYYMFKFLKKTRISGWMSLGGILLCITGKSREIHVCDKISCLVLFSYIFIKSQTVSIYKTHMLCSCSEAMFADLGHFSYMAIQIAFTFLVYPALILAYMGQAAYLSQHHDSDLRISFYVSVPASVRWPVLILAILASVVGSQAIISGTFSIINQSQSLGCFPRVKVVHTSDKIHGQVYIPEINWILMILCIAVTIGFRDTKHMGNAAGLAVMTVMLVTTCLTSLVIILCWHKPPIVALCFLLFFGSVELLYFSASLTKFCEGAWFPILLALFLMIIMFLWHYATIKKYEYDLHNKVSLDWLLALGPSLGVARVPGIGLVFTDLTTGIPANFSRFVTNLPAYHRILVFVCVKSVPVPHVTAAERYLVGRVGPAGHRSYRCIVRYGYRDVHQDIDSFESELVQMLADFIQYDWYRTRRNSMSIDDDASHSNESSSHRLTVIGTTGFSSQQGYDTDQSVQPASVSIGFPTVQSVTDVIEMAPMDVTERRVRFAIDDEPESDTRSEIGVQMQEELEDLHAAQEAGIAFILGHSHVRAKQGSSLLKKLALNYGYNFLRRNCRGPDVALKVPPVSLLEVGMVYIV. 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02041 829 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 310 827 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca3g02041 829 Pfam K+ potassium transporter 304 637 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca3g02041 829 Pfam K+ potassium transporter 25 278 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02041 Seca-Chr3 35837697 35842947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02041 1 829 Inorganic Solute Cotransporters AT2G40540 74.673 0.0 1256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02041 K03549 - gmx:100806122 1438.71