Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02017 ATGGCTTGTTCTAGATTAACAATTAGTTTGGCTCTCTTTGTTCTCGTTTTGGGGAGTGCCAATGCACAACTTTCTACAAATTTTTACTCTAGCTCTTGCCCAAAACTCCTTTCCACTGTGAAGTCCACATTGCAATCCGCCATATCAAAGGAAGCCCGCATGGGTGCTTCTCTGCTTCGCTTGTTCTTCCATGATTGTTTTGTCAATGGGTGTGATGGTTCAATTCTACTTGATGACACATCAAGCTTCACCGGGGAGAAGAATGCAAACCCCAACAGGAACTCTGCTCGTGGATACGAAGTCATTGACAACATAAAGTCAGCAGTAGAGAAAGTGTGCCCAGGAGTTGTGTCCTGTGCTGATATCCTTGCAATCTCTGCCAGAGACTCTGTTGAGATTCTTGGTGGTCCTACATGGAATGTGAAACTTGGAAGAAGAGACGCTAAGACGGCTAGCCTCTCTGCTGCCAACAATGGAATTCCTGCACCCACTTCTAACCTCAACCAACTCATCTCAAGGTTCAGCGCTCTTGGACTTTCCACCAAGGACTTGGTCGCATTATCTGGTGGTCACACAATTGGACAAGCAAGGTGCACTAACTTCAGGGCACGCATCTACAACGAGACCAACATAGATAGCTCTTTTGCTAGCACAAGGAAATCAAGCTGCCCCAGAGCCTCAGGGTCAGGGGACAACAATTTGGCACCCCTTGATCTTCAGACTCCAACTTCCTTTGACAACAACTACTTCAAGAACCTTGTTCAGAAGAAGGGTCTCCTCCACTCTGACCAGCAACTGTTCAATGGTGGGTCCACTGATTCCATAGTGCGTGGCTACAGCACTAACCCAAGCTCTTTTTCCTCTGATTTTGCCAGTGCCATGATCAAGATGGGAGATATTAGTCCTCTCACTGGCTCCAACGGAGAGATCAGGAAGAATTGTAGAAGGATCAACTAA 957 0.4671 MACSRLTISLALFVLVLGSANAQLSTNFYSSSCPKLLSTVKSTLQSAISKEARMGASLLRLFFHDCFVNGCDGSILLDDTSSFTGEKNANPNRNSARGYEVIDNIKSAVEKVCPGVVSCADILAISARDSVEILGGPTWNVKLGRRDAKTASLSAANNGIPAPTSNLNQLISRFSALGLSTKDLVALSGGHTIGQARCTNFRARIYNETNIDSSFASTRKSSCPRASGSGDNNLAPLDLQTPTSFDNNYFKNLVQKKGLLHSDQQLFNGGSTDSIVRGYSTNPSSFSSDFASAMIKMGDISPLTGSNGEIRKNCRRIN. 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02017 318 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g02017 318 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g02017 318 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g02017 318 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g02017 318 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g02017 318 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g02017 318 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g02017 318 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g02017 318 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g02017 318 ProSiteProfiles Plant heme peroxidase family profile. 23 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g02017 318 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Seca3g02017 318 CDD secretory_peroxidase 23 317 IPR033905 GO:0004601|GO:0042744
Seca3g02017 318 MobiDBLite consensus disorder prediction 217 236 - -
Seca3g02017 318 SUPERFAMILY Heme-dependent peroxidases 23 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca3g02017 318 Pfam Peroxidase 40 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g02017 318 FunFam Peroxidase 27 170 - -
Seca3g02017 318 PANTHER PEROXIDASE 72-RELATED 21 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g02017 318 Gene3D Peroxidase, domain 2 161 297 - -
Seca3g02017 318 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Seca3g02017 318 Gene3D - 27 315 - -
Seca3g02017 318 FunFam Peroxidase 161 297 - -
Seca3g02017 318 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g02017 318 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g02017 318 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g02017 318 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g02017 318 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02017 Seca-Chr3 35382486 35385200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02017 22 318 Peroxidase AT5G05340 79.798 0.0 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02017 K00430 - gmx:100803637 582.793