Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca3g01971 | ATGAGATTGCAGGAAAAGATTCAAGAAATGGAAGACCGTGAGGTGAAGTTGGTGATCCAAAAAAAGCTCTTTAAGAGTGATATGAACTCTAATAATGGGAGGTTTTCCATCCCAACACAACAAATTCAACAAGATGCAAGGGATTTCCTTATCGAAAGAGAGGAGTTCTATTTGACTGTAGGTGAAGGTGAAGGGAAAATCCAAAAGCTTGTTGGTATCTCAGTGTCTGTGTTGGATCCAAGTCTTAAACTTTACAACATGTGCTTCAAGAAATGGAAGATGGAGCACACAGAGGTGTACAATATAACTAGTGGATGGAACGACCTTGTGAGAAATAATTCTTTGAAAGCCAATGATACAATGCAATTGTGGTATTTTAGAAGCAACAATAATCACTTGTGTTTTGCACTCATCAAGATATAA | 423 | 0.3735 | MRLQEKIQEMEDREVKLVIQKKLFKSDMNSNNGRFSIPTQQIQQDARDFLIEREEFYLTVGEGEGKIQKLVGISVSVLDPSLKLYNMCFKKWKMEHTEVYNITSGWNDLVRNNSLKANDTMQLWYFRSNNNHLCFALIKI. | 141 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca3g01971 | 140 | Gene3D | - | 2 | 139 | IPR015300 | - | |
Seca3g01971 | 140 | ProSiteProfiles | B3 DNA-binding domain profile. | 90 | 140 | IPR003340 | GO:0003677 | |
Seca3g01971 | 140 | Pfam | B3 domain-containing protein At2g31720-like | 6 | 111 | IPR005508 | GO:0003677 | |
Seca3g01971 | 140 | PANTHER | B3 DOMAIN PLANT PROTEIN-RELATED | 3 | 140 | IPR005508 | GO:0003677 | |
Seca3g01971 | 140 | SUPERFAMILY | DNA-binding pseudobarrel domain | 18 | 134 | IPR015300 | - | |
Seca3g01971 | 140 | CDD | B3_DNA | 19 | 139 | IPR003340 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca3g01971 | Seca-Chr3 | 34602776 | 34603198 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca3g01971 | 3 | 137 | B3 DNA Binding Superfamily | AT1G05930 | 27.941 | 5.16e-12 | 60.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca3g01971 | - | - | tpra:123920509 | 139.428 |