Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01971 ATGAGATTGCAGGAAAAGATTCAAGAAATGGAAGACCGTGAGGTGAAGTTGGTGATCCAAAAAAAGCTCTTTAAGAGTGATATGAACTCTAATAATGGGAGGTTTTCCATCCCAACACAACAAATTCAACAAGATGCAAGGGATTTCCTTATCGAAAGAGAGGAGTTCTATTTGACTGTAGGTGAAGGTGAAGGGAAAATCCAAAAGCTTGTTGGTATCTCAGTGTCTGTGTTGGATCCAAGTCTTAAACTTTACAACATGTGCTTCAAGAAATGGAAGATGGAGCACACAGAGGTGTACAATATAACTAGTGGATGGAACGACCTTGTGAGAAATAATTCTTTGAAAGCCAATGATACAATGCAATTGTGGTATTTTAGAAGCAACAATAATCACTTGTGTTTTGCACTCATCAAGATATAA 423 0.3735 MRLQEKIQEMEDREVKLVIQKKLFKSDMNSNNGRFSIPTQQIQQDARDFLIEREEFYLTVGEGEGKIQKLVGISVSVLDPSLKLYNMCFKKWKMEHTEVYNITSGWNDLVRNNSLKANDTMQLWYFRSNNNHLCFALIKI. 141
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01971 140 Gene3D - 2 139 IPR015300 -
Seca3g01971 140 ProSiteProfiles B3 DNA-binding domain profile. 90 140 IPR003340 GO:0003677
Seca3g01971 140 Pfam B3 domain-containing protein At2g31720-like 6 111 IPR005508 GO:0003677
Seca3g01971 140 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 3 140 IPR005508 GO:0003677
Seca3g01971 140 SUPERFAMILY DNA-binding pseudobarrel domain 18 134 IPR015300 -
Seca3g01971 140 CDD B3_DNA 19 139 IPR003340 GO:0003677
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Seca3g01971 Seca-Chr3 34602776 34603198 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01971 3 137 B3 DNA Binding Superfamily AT1G05930 27.941 5.16e-12 60.1
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01971 - - tpra:123920509 139.428