Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01945 ATGGGTGAACTAGAACCATATTTGGCAGTGTTTGTAATGCAATTAATATATGCCGGGATGACTTTGTTGTCCAAGGCTGCGTTTAATGGGGGAATGAATACTTGTGTCTTTGTCTTTTATAGACAACTCACTGGTGCCATTGTTTTGGTCCCTCTGGCCATGATATTTGAACGCAAAAAAGCAGAGCCAGTGCCATTCTCATTTATAACCTTCTGCAAGATTTTTATGCTCTCATTGTTTGGACTTACTTTTGTTCTGAATGTGCATGGTATTGCCCTTGTCTACACCTCTGCCACTTTGGCTGCTGCAATTGTTAATTGCCTCCCTGCTTCAACATTCTTTTTTGCTGTGCTGCTAAGAATGGAGAGGGTAAATATAAGGACCAAATCTGGAATTGCCAAGATAGTAAGTGTATTGCTGTGCATGGTTGGTGTAGCGACCCTGGCATTTTACAAGGGACCTCAATTAAGGAACGTTCATCATCTCCCATCTGGATATCACAACAGTCAACAACATGAAGATCATGTTTCATCTAACAAAAGATGGATATTGGGTTCTTTACTCTTGTTCTTAGGCATCATCTTGTGGAGTTTTTGGCTTGTAATTCAGGCTCAATTTCTCAAAAGTTTCCCTTCAAAATTGACGTTCACAAGCCTTCAGAGCCTATCAAGTGCAATTCAGTCATTTGGTATTGCTATAGCTTTTGAAAGAGATATTCAGCAGTGGAAGTTGGGTTGGAACATGAGACTGCTTGCAGTTGTTTACTGTGTAAGTATCAAATATTGCATTCTAGTTATGTATTTTCTTATCTATGGTGCATTGATGCTAGCAAGTGGCAAGAATGTTATTGTGATGTCTGATATAATATTTTTCCAATTTATCTGA 885 0.3887 MGELEPYLAVFVMQLIYAGMTLLSKAAFNGGMNTCVFVFYRQLTGAIVLVPLAMIFERKKAEPVPFSFITFCKIFMLSLFGLTFVLNVHGIALVYTSATLAAAIVNCLPASTFFFAVLLRMERVNIRTKSGIAKIVSVLLCMVGVATLAFYKGPQLRNVHHLPSGYHNSQQHEDHVSSNKRWILGSLLLFLGIILWSFWLVIQAQFLKSFPSKLTFTSLQSLSSAIQSFGIAIAFERDIQQWKLGWNMRLLAVVYCVSIKYCILVMYFLIYGALMLASGKNVIVMSDIIFFQFI. 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01945 294 PANTHER WAT1-RELATED PROTEIN 6 268 IPR030184 GO:0016020|GO:0022857
Seca3g01945 294 Pfam EamA-like transporter family 7 140 IPR000620 GO:0016020
Seca3g01945 294 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01945 Seca-Chr3 34199280 34202232 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01945 1 258 Nodulin-like Gene Family AT5G64700 54.753 1.28e-82 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01945 - - vun:114162763 367.081