Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01941 ATGCTTGGGGATATTGCAAACAAAAGGTGTCAGCGTCCATACTTTTGTGGTCCCCAAACATGTAAATTAAAGCAGCTCCTCATCTCCCCCACACACGTCCCTCCATCTACAACACCCAATTCTAAGGGTTGCCTTCATTTTCAAGAACCTCTCTACAACACACACACAGACATATATATATATATATTTATATATATCAACTGTGAAACGTCTCACCACTCACCTCAAACTCAAACTCCAAGCAAAAAATTAAAGAAGAAAAACGTAATGAAAGGAAACAAGCCCTATGTGGTTGTGATTGTTATACAATCCATATACGCCGTTATGTTTCTTCTCTCAAAAGCTGCATTCGACCATGGAATGAACAATTACATCTTCATCTTCTACAGACAAGCAGTTGCAACCCTTTTCCTCATCCCTTTTGCTTTCTTCTTCGAATGGAAACTAGCACCTCCTTTGCCTTTTGGGACCTTCTGCAAGATTTTCTTCCTTTCTCTCTGCGGGATTACTTTAAGCTTGGACATATATGGGATTGGTCTTGTTTACACCTCTGCAACTCTGGCTGCTGCTGTCACAAACTGTCTTCCAGTTATCACATTCTTCTTGGCGCTCCTACTCAGGATTGAGAGTTTGAACATAAAGACGAAAGCTGGGATTGCCAAGTTGGTAGGCGTTGTAGCATGTTTGGCTGGTGCATCAATTCTTGCCTTTTATAAAGGTCCTCATTTTAAACTTTTAAGTCATCATCACCTTCTGGGATACCATCCAAGCCAACAACATCAAGGTCATGCTTCATCTAGTACATGGATAAAGGGTTGCTTCCTCTTGCTCCTTTCCAACACATTTTGGGGGCTATGGTTGGTGCTACAGGCATTTGTTATAAAAAGCTACCCTTCAAAATTGATGTTCACGACTCTTCAATGTTTCTTAAGCTCAATTCAGTCTTTCGTCATTGCCTTTGCCATAGAAAGGAACATTGAAGAATGGAAGTTGGGTTGGAATGTCAGGCTCCTCGCTGTAGTATATTGTGGAATTATGGTCACGGGTGTCACGTATTACTTACAGACATGGGTTGTAGAGAAGAAAGGACCTGTATTTCTAGCCATGTCAACGCCACTAGCTCTTATTATTACAATCTTCTCCTCTTCAATTGTCTTGGGGGAGATAATAAGTTTGGGGAGCCTTTTAGGTGGGTTCGTATTGGTTCTAGGACTATACAGCGTATTATGGGGAAAAAGCAAGGAGCAAATGCCGAAAGCCTCGCTAGACTTGGAGCAGACATCCGAGCAAGCATAG 1296 0.4174 MLGDIANKRCQRPYFCGPQTCKLKQLLISPTHVPPSTTPNSKGCLHFQEPLYNTHTDIYIYIFIYINCETSHHSPQTQTPSKKLKKKNVMKGNKPYVVVIVIQSIYAVMFLLSKAAFDHGMNNYIFIFYRQAVATLFLIPFAFFFEWKLAPPLPFGTFCKIFFLSLCGITLSLDIYGIGLVYTSATLAAAVTNCLPVITFFLALLLRIESLNIKTKAGIAKLVGVVACLAGASILAFYKGPHFKLLSHHHLLGYHPSQQHQGHASSSTWIKGCFLLLLSNTFWGLWLVLQAFVIKSYPSKLMFTTLQCFLSSIQSFVIAFAIERNIEEWKLGWNVRLLAVVYCGIMVTGVTYYLQTWVVEKKGPVFLAMSTPLALIITIFSSSIVLGEIISLGSLLGGFVLVLGLYSVLWGKSKEQMPKASLDLEQTSEQA. 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01941 431 SUPERFAMILY Multidrug resistance efflux transporter EmrE 129 235 - -
Seca3g01941 431 PANTHER WAT1-RELATED PROTEIN 94 421 IPR030184 GO:0016020|GO:0022857
Seca3g01941 431 SUPERFAMILY Multidrug resistance efflux transporter EmrE 333 414 - -
Seca3g01941 431 Pfam EamA-like transporter family 271 409 IPR000620 GO:0016020
Seca3g01941 431 Pfam EamA-like transporter family 95 223 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01941 Seca-Chr3 34169307 34172650 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01941 90 343 Nodulin-like Gene Family AT5G64700 62.016 9.02e-98 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01941 - - gmx:100804562 548.51