Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01929 ATGGAATGTGAAATCAAAGACAAATCGGCGAAGATAGTAAGAGTGGGAGTGGGAAAAGACTATTACGTTTTGAAATCCAAAATCGGAGAGGGTTCATACTCCACAGTGTGGAAATCTGAGCAGAGACCAAGTGGTCAAGAGGTGGCGGTCAAACAGGTCTTCCTCTCCAAACTCACCCCTCGCCTCAAGGCTTGCTTGGACTGCGAGACCAATTTCTTGTCTTCTGTTAATCATCCTAATATTATTCGCCTTCTTCACTTCTTCCAGGCTGATGGATGTGTATACCTGGTCCTGGAGTTTTGTGCTGGAGGGAATTTGGCTTCTTATATTCGACGCCATGGGAGAGTTCAACAACAAACGGCCAGAAAATTCATGCAGCAGCTTGGCTCTGGTCTTAAAGTATTACACTCTCACGGCATCATTCACAGAGACTTGAAACCAGAGGTTTCAGATTGTCCAAAACTTAAGGAAAACGGAAAACTGCAGCCTTTTTTCACAAAGGGATGTCCAAGTTGCATAGGAAACCATTCTATTACTGATTATCTATTTTTAGTAACTATCATAATGAGATCTGAAACAAATTTGTTTGCATTGGTGCTGTTTTTGAATCAGAACATTTTGCTATCAAGCCGTGGGGCTGATGCCGTGCTAAAGATAGCTGATTTTGGTCTCTCAAGAATTGCTCGCCCGGGTGAGTATGCTGAGACTGTTTGTGGTTCTCCATTATACATGGCTCCAGAAGTTCTTCAGTTCCAGAGATATGATGCCAAGGTTGACATGTGGAGTGTTGGGGCCATTCTTTTTGAGCTTCTAAATGGCTACCCACCTTTTAATGGCAGAAATAATGTTCAGCTGCTGAAAAATATCAGATCCTGTACCTGTCTTCCATTTCCTAAACTGATTATTTCAGGACTGGATCCTGACTGTCTAGATATTTGTTCAAGACTACTATGCTCAAATCCAGTGGAGCGCCTATCTTTTGATGAATTTTATTGGCATAGCTTTCTACAAAGAAAATTGATGGAAAGTTGA 1032 0.4186 MECEIKDKSAKIVRVGVGKDYYVLKSKIGEGSYSTVWKSEQRPSGQEVAVKQVFLSKLTPRLKACLDCETNFLSSVNHPNIIRLLHFFQADGCVYLVLEFCAGGNLASYIRRHGRVQQQTARKFMQQLGSGLKVLHSHGIIHRDLKPEVSDCPKLKENGKLQPFFTKGCPSCIGNHSITDYLFLVTIIMRSETNLFALVLFLNQNILLSSRGADAVLKIADFGLSRIARPGEYAETVCGSPLYMAPEVLQFQRYDAKVDMWSVGAILFELLNGYPPFNGRNNVQLLKNIRSCTCLPFPKLIISGLDPDCLDICSRLLCSNPVERLSFDEFYWHSFLQRKLMES. 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01929 343 ProSiteProfiles Protein kinase domain profile. 22 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g01929 343 FunFam - 201 342 - -
Seca3g01929 343 SUPERFAMILY Protein kinase-like (PK-like) 20 335 IPR011009 -
Seca3g01929 343 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 13 338 IPR045269 GO:0004674|GO:0006914
Seca3g01929 343 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Seca3g01929 343 Gene3D Transferase(Phosphotransferase) domain 1 17 149 - -
Seca3g01929 343 Gene3D Transferase(Phosphotransferase) domain 1 203 343 - -
Seca3g01929 343 Pfam Protein kinase domain 204 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g01929 343 Pfam Protein kinase domain 22 148 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01929 Seca-Chr3 33900466 33903905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01929 22 329 CBL-interacting serine-threonine protein kinases AT2G30360 30.868 5.68e-38 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Seca3g01929 Pkinase 8.6e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01929 - - gmx:100787409 516.153