Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01902 ATGCAGTGGGTATGTGTAACATGGACAGACGAGGAATGCAAGAAGGCGTTTAAGAATTGTTATGAGGCACTTCCGGTGGACGGAAAATTGATTGTTTGCGAGCCGGTGCTGCCGGAGGTAACTGATGAGAGTCAAAGAACAAGAGCATTGCTTGGGGGTGACATATACATAATGACAATGTATAGATCTAAGGGAAAGCACAGGACTGAACAAGAGTTCAAACAACTCGGCATTTCTGCTGGTTTTCCTCATATCCGTGCCTTCTATATTGATTCTTTTTTCGCTATACTTGAGTTTCGGAAATGA 306 0.4314 MQWVCVTWTDEECKKAFKNCYEALPVDGKLIVCEPVLPEVTDESQRTRALLGGDIYIMTMYRSKGKHRTEQEFKQLGISAGFPHIRAFYIDSFFAILEFRK. 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01902 101 Gene3D Vaccinia Virus protein VP39 1 87 IPR029063 -
Seca3g01902 101 Pfam O-methyltransferase domain 1 82 IPR001077 GO:0008171
Seca3g01902 101 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 99 IPR029063 -
Seca3g01902 101 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 101 IPR016461 GO:0008168
Seca3g01902 101 PANTHER O-METHYLTRANSFERASE 1 88 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01902 Seca-Chr3 33375427 33375732 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01902 1 101 Monolignol Biosynthesis Gene Families AT3G53140 72.277 3.73e-52 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01902 - - aprc:113853000 167.162