Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01899 ATGTATCGGCTAGCATGGACAGATGAGGAATGCAAGCAGGTGTTGCAAAATTGTTACAAGGCACTTCCGGTGAACGGAAAATTGATTATTTGCGAGCCGGTGCTGCCGGAGGTGACCGATGAGAGTCAAAGAACAAGAGCATTGCTTGGGGGTGACATATTCATAATGACAATGTATGGATCTAAGGGAAAGCACAGGACTGAACAACACTTCAAACAGCTTGGCATTTCTGTTGGTTTTCCTCATTTCCGTGCCTTCTATTTTGATTCTTATTTGGCTATACTCGAGTTTCGGAAATGA 300 0.4367 MYRLAWTDEECKQVLQNCYKALPVNGKLIICEPVLPEVTDESQRTRALLGGDIFIMTMYGSKGKHRTEQHFKQLGISVGFPHFRAFYFDSYLAILEFRK. 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01899 99 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 99 IPR016461 GO:0008168
Seca3g01899 99 Gene3D Vaccinia Virus protein VP39 4 99 IPR029063 -
Seca3g01899 99 PANTHER O-METHYLTRANSFERASE 5 86 IPR016461 GO:0008168
Seca3g01899 99 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 5 97 IPR029063 -
Seca3g01899 99 Pfam O-methyltransferase domain 6 80 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01899 Seca-Chr3 33277860 33278159 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01899 6 99 Monolignol Biosynthesis Gene Families AT3G53140 70.213 1.79e-46 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01899 - - aprc:113853000 164.851