Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca3g01882 | ATGCCCACTTGGTGGGGTAGAAAATCCAGCAAGAGCAAGGACCAGGTGCAGGAAGAGGAAGCACGTGGTGGTAGTGGTGGCGGCGGTGGCGTGCTTCAATTCAATTTCATCAAGAACGCTGCAAAGAAAGGGAAAGGTGAAAGGCCTAAGAGTTTTGACGATGCTGCTAGGAATTCTCCAAGGGCAAGCAGGGATTTCTCTTCTTCTTCTGCTTGCTTTGATTCTGATGGCGGCGAGAAGAGAGGCCTTCCTTTGCCTCGACCCTCTGTTTCTTCCACCCAAAGCTTTGGCAACGATCAGGGTCTTGTTTTCGGATCTGCTTCCGTTTCTGGTTCTAGCGTTAGTTCCACTGGCTCCTATGATGATCATCCAACCTATCACTCTCAGATTAATGGCTCAAGAGGACAAGGTGACTTGAAGTTCAATGTGAGGTCTAAAAGCCCAGGTCCTGGATCAAGAGGGCCAACCAGCCCTACATCACCTCTTCATCCAAGGTTGCATGTTTTGAGTCTTGACTCCCCTACAGGCAGGCAAGAAGATGGAAGGAGTCAATGTCATCCATTGCCTCTTCCACCAGGCTCTCCTACTAGTCCTTCTTCTCTTTCCAACACAAGAGCAAATGGACAGCTAGAAAACACTACCGGTAACATTTGCAAGTGGAAGAAAGGAAAGCTCTTAGGACGGGGAACATTTGGGCATGTTTACCTGGGATTCAATAGTGAAAGTGGACAATTGTGTGCAATTAAAGAAGTAAGGCTTGTCTCTGATGATCAAACATCAAAAGAGTGCCTCAAACAACTTAATCAGGAGATTCATTTGCTTCGTCAGCTTTTACATCCAAACATTGTTCAATACTATGGGAGTGATTTGGGAGAAGAAGCACTTTCTGTTTATTTGGAATATGTCTCTGGCGGTTCTATTCATAAATTACTTCAGGAATATGGGCCCTTTAAGGAGCCTGTAATTCAAAATTATACCAGGCAGATTGTCTCTGGACTTTCCTATCTACATGGGAGAAATACAGTGCATAGGGATATCAAAGGGGCCAACATACTAGTTGATCCTAATGGCGAAATTAAGCTTGCGGACTTTGGAATGGCTAAACATTTTGTTGTGAAACAGATAAATTCTTCTGCCTCAATGCTTTCTTTCAAAGGAAGTCCATACTGGATGGCACCTGAGGTTGTAATGAATACAAATGGCTATAGTCTTCCTGTTGATATATGGAGCTTGGGATGCACAATTCTTGAAATGGCAACATCGAAGCCTCCATGGAATCAATATGAAGGGGTGGCTGCAATATTTAAAATTGGTAACAGCAAAGATATGCCAGAAATTCCTGATCACCTCTCAAATGATGCGAAGAATTTCATTATGCTATGCTTACAAAGAGATCCATCAGCTCGCCCAACAGCCCAAATGTTACTAGATCACCCCTTTATTCGAGATCAGTCAGCAACAAAAGCTACAAATGTCAGAATAACAAGGGATGCTTTTCCCTACATGTTTGATGGAAGCCGGACACCACCGCCAGTTTTAGAGCATCATTCCAATAGAACAAGTATAACTTCACTGGATGGAGATTATGCAACAAAGCCAGCTATTGCAGCTTCACGAGCAATAAGAAGCCCAAGAGATAACACAAGAACGATCACATCTTTACCAGTGTCACCCTGTTCAAGTCCATTACGACAGTATGGGCCAGCACACAAGAGCTGTTTCCTTTCTCCCCCTCATCCAACTTACACAATGATGGGACAACACACCCTCTCCTCATATCCATTGAGATCAAATGCCAATACCACGTTCACACTTGATCCTTGGCATGAAACATCTTTATACAAACCCCACACACCCGGTGGATCCCCAAGAACGAGACTCATTTGA | 1887 | 0.4414 | MPTWWGRKSSKSKDQVQEEEARGGSGGGGGVLQFNFIKNAAKKGKGERPKSFDDAARNSPRASRDFSSSSACFDSDGGEKRGLPLPRPSVSSTQSFGNDQGLVFGSASVSGSSVSSTGSYDDHPTYHSQINGSRGQGDLKFNVRSKSPGPGSRGPTSPTSPLHPRLHVLSLDSPTGRQEDGRSQCHPLPLPPGSPTSPSSLSNTRANGQLENTTGNICKWKKGKLLGRGTFGHVYLGFNSESGQLCAIKEVRLVSDDQTSKECLKQLNQEIHLLRQLLHPNIVQYYGSDLGEEALSVYLEYVSGGSIHKLLQEYGPFKEPVIQNYTRQIVSGLSYLHGRNTVHRDIKGANILVDPNGEIKLADFGMAKHFVVKQINSSASMLSFKGSPYWMAPEVVMNTNGYSLPVDIWSLGCTILEMATSKPPWNQYEGVAAIFKIGNSKDMPEIPDHLSNDAKNFIMLCLQRDPSARPTAQMLLDHPFIRDQSATKATNVRITRDAFPYMFDGSRTPPPVLEHHSNRTSITSLDGDYATKPAIAASRAIRSPRDNTRTITSLPVSPCSSPLRQYGPAHKSCFLSPPHPTYTMMGQHTLSSYPLRSNANTTFTLDPWHETSLYKPHTPGGSPRTRLI. | 629 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca3g01882 | 628 | SMART | serkin_6 | 220 | 481 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca3g01882 | 628 | Pfam | Protein kinase domain | 221 | 481 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca3g01882 | 628 | ProSiteProfiles | Protein kinase domain profile. | 220 | 481 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca3g01882 | 628 | ProSitePatterns | Protein kinases ATP-binding region signature. | 226 | 249 | IPR017441 | GO:0005524 | |
Seca3g01882 | 628 | CDD | STKc_MEKK1_plant | 219 | 481 | - | - | |
Seca3g01882 | 628 | MobiDBLite | consensus disorder prediction | 87 | 140 | - | - | |
Seca3g01882 | 628 | MobiDBLite | consensus disorder prediction | 41 | 60 | - | - | |
Seca3g01882 | 628 | SUPERFAMILY | Protein kinase-like (PK-like) | 219 | 562 | IPR011009 | - | |
Seca3g01882 | 628 | MobiDBLite | consensus disorder prediction | 1 | 210 | - | - | |
Seca3g01882 | 628 | Gene3D | Transferase(Phosphotransferase) domain 1 | 218 | 501 | - | - | |
Seca3g01882 | 628 | PANTHER | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED | 76 | 489 | - | - | |
Seca3g01882 | 628 | FunFam | Mitogen-activated protein kinase kinase kinase | 218 | 505 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca3g01882 | Seca-Chr3 | 32946406 | 32952498 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca3g01882 | 1 | 545 | MAP Kinase Kinase Kinase | AT1G53570 | 58.887 | 0.0 | 568 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | STE_STE11 | Seca3g01882 | Pkinase | 1.6e-70 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca3g01882 | K04421 | - | gmx:100813122 | 968.763 |