Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01879 ATGGAGTACACTCTTGGATCAGGAGAAGTTCTTTTAGATGGTGAAAACATCAAGAATTTGAAACTGGAATGGCTGAGGAGCCAAATTGGACTGGTCACCCAGGAACCTGCTTTGCTCTGCTTGAGTATAAAAGACAACATTGCTTATGGGAGGGATACCACCACTGATCAAATTGTAGAGGCTGCTAAAATAGCTCATGCACATACCTTTATCAGCTCATTGGATAAAGGTTGGCAGGGCTGGTTTAGCTTTGACAGAAGAGCAGAAAATAAAACTTTCTATAGCAAGAGCTGTGCTTCTAAGTCCATCCATTCTTCTGCTTGA 324 0.4198 MEYTLGSGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLCLSIKDNIAYGRDTTTDQIVEAAKIAHAHTFISSLDKGWQGWFSFDRRAENKTFYSKSCASKSIHSSA. 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01879 107 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 81 IPR027417 -
Seca3g01879 107 Gene3D - 3 78 IPR027417 -
Seca3g01879 107 PANTHER ABC TRANSPORTER B FAMILY 4 79 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01879 Seca-Chr3 32895360 32898130 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01879 3 81 Calmodulin-binding Proteins AT2G36910 41.250 8.43e-17 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01879 K05658 - gmx:100819266 131.339