Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01802 ATGAAGGTGAAGAAGGGATGGCTTGCTGTTCAAGTGGGTTTAGAAGACCAAGAAGAAGATGGATCTACCTCTCAGAGATTCGTCATCCCTATCTCCTATCTTTACCATCCTCTTTTCAAGCGTCTTCTAGACAAAGCTCGTGAGGTTTATGGCTACCACACCGATGGTCCTCTCAAGCTCCCTTGTTCTGTCGACGATTTCCTTCATCTCCGTTGGCGAATTGAAAAAGAGTCAAGCCCTCACCACCACCATAATCACCACTCTTTGAACTTCCACTCTTGTTAA 285 0.4561 MKVKKGWLAVQVGLEDQEEDGSTSQRFVIPISYLYHPLFKRLLDKAREVYGYHTDGPLKLPCSVDDFLHLRWRIEKESSPHHHHNHHSLNFHSC. 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01802 94 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 70 IPR003676 GO:0009733
Seca3g01802 94 Pfam Auxin responsive protein 3 73 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01802 Seca-Chr3 31671753 31672037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01802 3 75 Calmodulin-binding Proteins AT3G43120 46.575 7.10e-14 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01802 K14488 - gmx:100809305 150.214