Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01762 ATGCCAAAGTATCAAGGTGAAGAAGAGACAGGAAGGGCACCAAAGGGGCAATTTGTTGTTTATGTGGGAAAAGAACTAAAAAGGTTTACCTTACCACTATCTTACTTGAAGAACCCCATTTTCCAGTTACTGTTGGAGAAATCCGCAGAGGTGTATGGGTTTAGAAACTCGAGAGGCATAGTCCTTCCATGTGATGAATCAACCTTTGAAAGGCTCATTCAAGGTTGA 228 0.4167 MPKYQGEEETGRAPKGQFVVYVGKELKRFTLPLSYLKNPIFQLLLEKSAEVYGFRNSRGIVLPCDESTFERLIQG. 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01762 75 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 13 72 IPR003676 GO:0009733
Seca3g01762 75 Pfam Auxin responsive protein 9 73 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01762 Seca-Chr3 30690686 30690913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01762 5 74 Calmodulin-binding Proteins AT5G20810 44.286 1.16e-16 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01762 K14488 - nnu:104593708 100.523