Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01732 ATGGCTTCCCGTTATGATTTAATCTGTAATGTGAATGGAGGCTCTGAGCATAAGATATGGAGAATTAAAGTCAGAGTCATTAGGCTATGGAGGTCTTCATATTTTAAGGATAACAATAATAAACCAATGATTGAATTGGTTGTTTTGGACGAACAGGGAGGTCGTATCCAATGCACGGTGAAGAGCATTCATGTGTATCTGTTTGAGAATAGTATCAACGAAGGTAATGTGTACATGCTAGAAAACCTCAGCGTTGCACTTAACAGTGGAAAGTACAAACCTACAATGCATGAATTTAGAATGTTCTTCAAGAGAGAGACACGAGTTACTCTGGTAGAAGATTCTTCCATTCCCCTCTATGGTTTTTCATTTGTCCCATTCGTTGAAATATTGAATGGAACTAACGTTTGGTTGGTAAGTTTTATTTACACTATGTTTAATGATTTTTTTTATTTCATAATGATTTCATAG 471 0.3546 MASRYDLICNVNGGSEHKIWRIKVRVIRLWRSSYFKDNNNKPMIELVVLDEQGGRIQCTVKSIHVYLFENSINEGNVYMLENLSVALNSGKYKPTMHEFRMFFKRETRVTLVEDSSIPLYGFSFVPFVEILNGTNVWLVSFIYTMFNDFFYFIMIS. 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01732 156 Pfam Domain of unknown function DUF223 45 134 IPR003871 -
Seca3g01732 156 SUPERFAMILY Nucleic acid-binding proteins 16 115 IPR012340 -
Seca3g01732 156 CDD RPA1_DBD_A_like 21 109 - -
Seca3g01732 156 Gene3D - 8 115 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01732 Seca-Chr3 30148966 30149524 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01732 20 142 Core DNA Replication Machinery Family AT2G06510 28.906 7.78e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01732 - - aip:107647757 156.377