Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01719 ACCGTGACCGTGCTTTCGGCTGCGAAGGAAGCAGGGGTTCAGCGCGTGGTGGTCACTTCCTCAATCTCCGCCATTTCCCTGAGCCCTAGTTGGCCTTCTGATGTTGTCAAGAGAGAGGATTGCTGGACTGACATTGAATATTGCAAGCAAAAGGGGTTATGGTATCCAATGTCCAAGACATTGGTTGAGAAAGCTGCTTGGGATTTTGCCGAGGAGAATGGTTTGGATGTTGTGGTGGTGAATCCTGGTACTATGATGGGCCCTGTTATTCCACCAAGGCTCAATGCAAGCGTGCTCATGCTTGTTCGACTTCTTCAAGGTAAATTTAGGTGGCTAATTAGTAATAAGCTGATCATTTGTAAATTCCTATTTGTAGTTGTGTGTGTTGTGGAATATCTTTGA 402 0.4602 TVTVLSAAKEAGVQRVVVTSSISAISLSPSWPSDVVKREDCWTDIEYCKQKGLWYPMSKTLVEKAAWDFAEENGLDVVVVNPGTMMGPVIPPRLNASVLMLVRLLQGKFRWLISNKLIICKFLFVVVCVVEYL. 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01719 133 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 1 104 - -
Seca3g01719 133 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 114 IPR036291 -
Seca3g01719 133 Gene3D - 1 127 - -
Seca3g01719 133 Pfam NAD dependent epimerase/dehydratase family 1 99 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01719 Seca-Chr3 29699087 29699615 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01719 1 107 Monolignol Biosynthesis Gene Families AT5G58490 73.832 7.62e-55 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01719 - - jre:108989884 176.022