Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01716 ATGAATCTAAATGAGACGTTATTCCAAGCAGTGACTTTAATCAATTCATCAGCCTATAATTCACACTTTAACGTTTGCATTTCTACTCCGCCCTATATTCTCTCCGATGGCATATGGGGAGCACACATGTCAGAAAGGCCACCATCAAAATCGTCTTTCCCAATATTCCTTCTTCAATTCATTGTAATTTATGCTACAACACGGCTTTTTTATTTCCCTGTGAAGATGATGGGTTTACCTGTGCTCATTTCACAAATAATAGCTGGGCTAATTCTAGGGCCATCACTGCCTATATTGGAGGAAATCAAGGTGGCATTGTTCCCTTATGGAAGTCAAGATACACTTGCAACAATAACATCATTTGGTTATATATTATTCCTTTTTGAGACTGGTGTGAAAATGGATTGTAGCATGATCCTCAGAACAGGGAAAAAAGGATGGGCCATGGCAATTTTCGGGTTGATGACACCTCTGTTAATTGGTTTTGCATCTCAGCACACCTTTCCTGCATTTTTAAAAACAGCTTTAGAAGAAGATGTCAATCAAGCCCGGATTATAATGATAGTGCACAATACAACTTCATTTGCAATGATTGCTTCAGTCCTCAATGACCTTAAACTACTAAACACTGAACTTGGCAGATTGGCATTATCTAGTGCATTAGTGGGTGACATATTGAGTAGCATTCTTATAACTATTTCCTCAGGCTTGACAAATGAACATAACTTGATAAAAGTTGGTTTGAGGCTAGGATCTTTATGTGTCTTGGTAATGGTCATTATGTTTGTCTATCGTCCTGCAATGTTTAAGGTCATTGAGAACACACCAGAAGGAAAAGATGTGGATGATATTTATGTCCACTTTATCATTGGAATTCTCTTTTCTTTGGTTTGGTTTTCATTACCCTTGGAAAGGGGATCCATGACTCTACCTTTTCTTTTTGGATTGGCTACACCAGAAGGACCTCCACTAGGATCTACCTTGATTAAAAGGACTCATTTGTTAGGCACCAAATTGCTTTTGCCAATCTTCTTGACTACCTGTGCAATGAAGGTAGAAGCTTACTTCTTGAAATTATCATCATCAGCATTTTTAATTGCTACCTTCATTGTCCTTTTGGGTCATGGAATCAAAATGGTAGCATGCGTTGTATCTTCACTCTTTTTCAACATGCCTCTAAAGGATGGTTTGGCTCTAGCCTTCCTTTTCAACTTCAAAGGTGCTGTGGAAGTAGTCATGTACTCTACAGCATTGGACAGAAGTGTAATGAACTCTCCCCTCCTCATCTTCCACACACACACACACACATTACTTGTGCAGGATCTCTATCCTATTACTTATGCAGTGCTTATGATAGTAATGATGATTTCAAGCACCATTTCACATCTGTTGGTGAAATTTCTGTATGATCCTTCAAGGAAATATGCTGGCTATCAAAAAAGGAACATTTTTAGTTTGAAGCCAAACTCTGATTTTAGGATACAAGTTTGCATTCATAAACAACACCACATAACTCCTATCACCAGTGTTCTTGATCTATGTTACCCTACAGCAGAGGAACCTATCATTGTTGATGTCTTGCATTTAATTGAGCTAGTTGGAAGGACCTCACCCATTTTCATTACTCACAAGAAGAAGAAAGTTGTTGCTGAAGACTCTCAAAACTCCTACTCTTACAATGTCATTCTTGCTTTCAAACTTCTAGAAGATGAAAAACAAGGTGCAGTAGTAGTAAACCCCTACACAGCTATATCCCCACCTAACTTAATGCATGAAGACGTGTGTCATCTTGCATTAGACAAAGTTTCATCCATTATAATTCTTCCTTTTCATCGAAAATGGACTGCCTGTGGCAGAGTTGAATATGATGACAAGAACATGAGGACTTTAAATTGCATGGTGTTGGAAAGGGCTCCATGCTCAATTGGAATCTTAGTCACTCGAGCAATTCATCAAACAGGTACATCGCTTCAATTAGCACTGATATTTTTGGGTGGAAATGATGATAGAGAGGCTTTATGTTTGGCAAATAGAGCAGCCAGAGACCCTAGTGTTAATCTTATGGTGTATCACATTGTAAGCAAGGACAATGATGAAAAACAAGACTTGGGGGCAGTGCTTGATAGTGCAATGTTGAAAGATGTTAAGAAAGCACACTCTGATATGGGAAATATAAGTTATAGAGAAATAGAAGTGGAGGGTGGATCCCAAACAGTTTCTATTCTTCGTCAAGTGGTGGATGAACATGATTTTATTATAGTTGGGAGAAGACATGGCATCAATTCTCCTCAGACTACAGGGCTTCAACAATGGAGTGAGTTTTCAGAGTTAGGTTTGATTGGAGATTATCTTGCTTCAGCGGATCTTAACAGCAAATCATCTATTTTGGTGGTGCAACAACAACAACTATCCCTCTAG 2418 0.3859 MNLNETLFQAVTLINSSAYNSHFNVCISTPPYILSDGIWGAHMSERPPSKSSFPIFLLQFIVIYATTRLFYFPVKMMGLPVLISQIIAGLILGPSLPILEEIKVALFPYGSQDTLATITSFGYILFLFETGVKMDCSMILRTGKKGWAMAIFGLMTPLLIGFASQHTFPAFLKTALEEDVNQARIIMIVHNTTSFAMIASVLNDLKLLNTELGRLALSSALVGDILSSILITISSGLTNEHNLIKVGLRLGSLCVLVMVIMFVYRPAMFKVIENTPEGKDVDDIYVHFIIGILFSLVWFSLPLERGSMTLPFLFGLATPEGPPLGSTLIKRTHLLGTKLLLPIFLTTCAMKVEAYFLKLSSSAFLIATFIVLLGHGIKMVACVVSSLFFNMPLKDGLALAFLFNFKGAVEVVMYSTALDRSVMNSPLLIFHTHTHTLLVQDLYPITYAVLMIVMMISSTISHLLVKFLYDPSRKYAGYQKRNIFSLKPNSDFRIQVCIHKQHHITPITSVLDLCYPTAEEPIIVDVLHLIELVGRTSPIFITHKKKKVVAEDSQNSYSYNVILAFKLLEDEKQGAVVVNPYTAISPPNLMHEDVCHLALDKVSSIIILPFHRKWTACGRVEYDDKNMRTLNCMVLERAPCSIGILVTRAIHQTGTSLQLALIFLGGNDDREALCLANRAARDPSVNLMVYHIVSKDNDEKQDLGAVLDSAMLKDVKKAHSDMGNISYREIEVEGGSQTVSILRQVVDEHDFIIVGRRHGINSPQTTGLQQWSEFSELGLIGDYLASADLNSKSSILVVQQQQLSL. 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01716 805 Pfam Sodium/hydrogen exchanger family 62 463 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca3g01716 805 Gene3D - 55 476 IPR038770 -
Seca3g01716 805 PANTHER CATION/H + ANTIPORTER 47 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01716 Seca-Chr3 29662019 29665100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01716 25 803 Antiporter Super Family AT5G22900 33.694 6.80e-144 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01716 K26731 - gmx:100784321 810.446