Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01686 ATGGAAGTTGTAAGGGGAAAATTGAGGAAAAATGTGATTTCAAAGGCGTGGGAGCGTTGGAGATCGTCGTTAGGAGGTGGTACTGGCAATAAGTGGTCACAATTGAAAGGTACTAATTATTCAGAAAATGATTATGATGAGAATGAGAAGGGTCGTCAAATAGCACCTCATGGTTGCTTTTCAGTATATGTGGGACCCCAGAAACAAAGGTTTGTTGTGAAGATGGAGTTTGTTAACCACCCACTATTCCAGACACTGCTAGATGAAGCAGAATTAGAGTATGGGTTTACAAATGATGGCCCTATTTGTCTTCCCTGCAACGTTGATTTGTTCTATAAAGTGTTGGGTGAGATGGATCTCATTCCATGTACTCGTAGAAGCATTGCTGCTAAGGCCTTATCTTTTTTAGTTCTTCACAGCCCAGCTCGTCTTCTTTGTCATAAGCATAGGGGACGTCTTAGTGCATATAGTGTTATGGATTCGGAAATGCTGAAAATAAGCAGATTTGAGTAG 513 0.4094 MEVVRGKLRKNVISKAWERWRSSLGGGTGNKWSQLKGTNYSENDYDENEKGRQIAPHGCFSVYVGPQKQRFVVKMEFVNHPLFQTLLDEAELEYGFTNDGPICLPCNVDLFYKVLGEMDLIPCTRRSIAAKALSFLVLHSPARLLCHKHRGRLSAYSVMDSEMLKISRFE. 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01686 170 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 36 114 IPR003676 GO:0009733
Seca3g01686 170 Pfam Auxin responsive protein 32 115 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01686 Seca-Chr3 29105947 29106867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01686 31 116 Calmodulin-binding Proteins AT4G34750 37.209 9.95e-16 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01686 K14488 - gmx:100789525 178.333