Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01685 ATGGCAAAAAATGAACTTCATGTAAAGCAAGGAGAACCAACTCGAGTTCAGCCTGCAGAGGAAACAGAAAAAGGGCTTTACTTTCTTTCAAACCTTGACCAGAACATTGCAGTTCCAGTTCGCACGGTTTATTGCTTCAAATCAGCTTCTAGAGGAAATGAGGATGCTGCACAAGTTATTAAGGACTCCTTGTCAAAGATTCTTGTTCCTTATTATCCTATGGCAGGAAAGTTGATGATTGGTACAGAAGGGAAGTTGATAGTGGATAACACAGGGGAGGGTGCTGTATTTGTTGAGGCTGAAGCAGATTGCAACATAGAAGACATTGGGGACTTAACAAAGCCTGACCCTGATGCTCTTGGGAAACTGGTTTATGACACCCCTGGTGCTCAGAACATACTTGAGATGCCTCTTATGGCAGTTCAGGTGACAAAATTCAAATGTGGGGGATTCACTTTGGGACTAAACATGATTCATTGCATGAAAGATGGACTATGTGCCATGGAGTTTGTGAATGCATGGAGTGAGACAGCTAGAGGTTTGGACTTAAAGATTCAACCCTTTCTTGATCGAACCATAATCAAAGCACGTAACCCTCCTAAAATAGAGTTCCAACACCATGAATTTGATGAAATTGAAGATATATCAAATACTAAAAAACTTTATGAAGAAGAAAATATGCTCTACAGATCCTTCAGTTTTGATTATAAGAAGCTTGAATTGCTTAAGAAAAAGGCCACTGAAGATGGGGTAATAGAAAAGTGCTCTACTTTTGAAGCCCTCTCAGGTTTTGTATGGAGAGCTCGAACTGAAGCCTTAAAAATGCATCCTGATCAACAAACAAAGCTACTCTTTGCAGTTGATGGAAGGTCAAGATTTGTGCCCCCAATACCAGAAGGATACTTTGGCAATGCTATAGTGTTGACAAATTCCCTGTGTAAGGCAGGTGAACTATTGAATAATCCTCTGTCATTTACAGTGGGATTGATTCGCAAGGCAATTGACATGGTCACAGATAGTTATATGAGATCTGCTATTGACTATTTTGAAGTCAAAAGAGCCAGGCCTTCCTTAACAGCCACCCTATTGATCACAACTTGGACTAGGCTATCTTTCCACACTACAGACTTTGGTTGGGGAGAACCTTTATGTTCTGGTCCTGTGACCTTGCCAGAGAGAGAAGTTATTTTGTTCTTATCACACGGTCAAGAAAGGAAAAGCATAAATGTGCTCCTAGGTTTACCTGCTTCTGCCATGGAAATTTTTGAAGCACTGATGATGCAGGTGTGA 1290 0.4078 MAKNELHVKQGEPTRVQPAEETEKGLYFLSNLDQNIAVPVRTVYCFKSASRGNEDAAQVIKDSLSKILVPYYPMAGKLMIGTEGKLIVDNTGEGAVFVEAEADCNIEDIGDLTKPDPDALGKLVYDTPGAQNILEMPLMAVQVTKFKCGGFTLGLNMIHCMKDGLCAMEFVNAWSETARGLDLKIQPFLDRTIIKARNPPKIEFQHHEFDEIEDISNTKKLYEEENMLYRSFSFDYKKLELLKKKATEDGVIEKCSTFEALSGFVWRARTEALKMHPDQQTKLLFAVDGRSRFVPPIPEGYFGNAIVLTNSLCKAGELLNNPLSFTVGLIRKAIDMVTDSYMRSAIDYFEVKRARPSLTATLLITTWTRLSFHTTDFGWGEPLCSGPVTLPEREVILFLSHGQERKSINVLLGLPASAMEIFEALMMQV. 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01685 429 FunFam Spermidine hydroxycinnamoyl transferase 6 209 - -
Seca3g01685 429 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 15 424 - -
Seca3g01685 429 Gene3D - 2 210 IPR023213 -
Seca3g01685 429 Gene3D - 211 429 IPR023213 -
Seca3g01685 429 Pfam Transferase family 7 424 - -
Seca3g01685 429 FunFam Tryptamine hydroxycinnamoyl transferase 213 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01685 Seca-Chr3 29085870 29088255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01685 14 429 Monolignol Biosynthesis Gene Families AT5G48930 37.037 3.21e-92 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01685 K15400 - gmx:100794490 763.066