Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g01638 ATGAGACGCTTCAGGGCTGTCTTCCGTCCCACAGAGGACCACCTTCCTATTCCGAGATGGTTTTATCAACGATGGGGAAACAACTTGTCGGAAATCATCGTTCTGAGGGACCCTTTTGGAAACAAGTTTTCCATCTGTATCCGAGTCATGGCTGGTCGTGTATACTTTACCCTGGGTTTGGACCTTCTCACTCGTGATTACAGCATACAGTTACCCATGTTCATCAAGTTCACGCTCGAGAATCCCATGTGTTTTCGCATTAGGGTCTACTCACACACCCTCGATGAGATAAACTACTCTATCCTCAACGCATGTTAA 318 0.4654 MRRFRAVFRPTEDHLPIPRWFYQRWGNNLSEIIVLRDPFGNKFSICIRVMAGRVYFTLGLDLLTRDYSIQLPMFIKFTLENPMCFRIRVYSHTLDEINYSILNAC. 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g01638 105 Gene3D - 2 94 IPR015300 -
Seca3g01638 105 SUPERFAMILY DNA-binding pseudobarrel domain 11 91 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g01638 Seca-Chr3 28277517 28278475 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g01638 17 99 B3 DNA Binding Superfamily AT4G01580 28.916 4.03e-07 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g01638 - K10242 mtr:120578168 43.8986